Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.99■□□□□ 0.31
SNX27Q96L92 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.99■□□□□ 0.31
SNX27Q96L92 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNX27Q96L92 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.99■□□□□ 0.31
SNX27Q96L92 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNX27Q96L92 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SNX27Q96L92 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SNX27Q96L92 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.99■□□□□ 0.31
SNX27Q96L92 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.99■□□□□ 0.31
SNX27Q96L92 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.99■□□□□ 0.31
SNX27Q96L92 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
SNX27Q96L92 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.98■□□□□ 0.31
SNX27Q96L92 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
SNX27Q96L92 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
SNX27Q96L92 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.98■□□□□ 0.31
SNX27Q96L92 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.98■□□□□ 0.31
SNX27Q96L92 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.98■□□□□ 0.31
SNX27Q96L92 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.98■□□□□ 0.31
SNX27Q96L92 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.98■□□□□ 0.31
SNX27Q96L92 AC253536.4-201ENST00000440539 267 ntBASIC16.98■□□□□ 0.31
SNX27Q96L92 AC011495.1-201ENST00000498085 584 ntBASIC16.98■□□□□ 0.31
SNX27Q96L92 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.98■□□□□ 0.31
SNX27Q96L92 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.98■□□□□ 0.31
SNX27Q96L92 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.98■□□□□ 0.31
SNX27Q96L92 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.98■□□□□ 0.31
SNX27Q96L92 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.98■□□□□ 0.31
SNX27Q96L92 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.98■□□□□ 0.31
SNX27Q96L92 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.98■□□□□ 0.31
SNX27Q96L92 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.98■□□□□ 0.31
SNX27Q96L92 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SNX27Q96L92 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SNX27Q96L92 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SNX27Q96L92 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SNX27Q96L92 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
SNX27Q96L92 LINC02199-201ENST00000506655 2702 ntBASIC16.98■□□□□ 0.31
SNX27Q96L92 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SNX27Q96L92 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.97■□□□□ 0.31
SNX27Q96L92 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.97■□□□□ 0.31
SNX27Q96L92 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SNX27Q96L92 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
SNX27Q96L92 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
SNX27Q96L92 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SNX27Q96L92 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SNX27Q96L92 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.97■□□□□ 0.31
SNX27Q96L92 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.97■□□□□ 0.31
SNX27Q96L92 GOLGA2P4-201ENST00000441462 777 ntBASIC16.97■□□□□ 0.31
SNX27Q96L92 LDHBP1-201ENST00000455730 1119 ntBASIC16.97■□□□□ 0.31
SNX27Q96L92 RN7SL837P-201ENST00000463010 287 ntBASIC16.97■□□□□ 0.31
SNX27Q96L92 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.97■□□□□ 0.31
SNX27Q96L92 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.97■□□□□ 0.31
SNX27Q96L92 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.97■□□□□ 0.31
SNX27Q96L92 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.97■□□□□ 0.31
SNX27Q96L92 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.97■□□□□ 0.31
SNX27Q96L92 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.97■□□□□ 0.31
SNX27Q96L92 AC132938.2-201ENST00000579188 680 ntBASIC16.97■□□□□ 0.31
SNX27Q96L92 AC015910.1-201ENST00000579400 975 ntBASIC16.97■□□□□ 0.31
SNX27Q96L92 RN7SL219P-201ENST00000582872 296 ntBASIC16.97■□□□□ 0.31
SNX27Q96L92 MIR6869-201ENST00000619434 62 ntBASIC16.97■□□□□ 0.31
SNX27Q96L92 AL591163.1-201ENST00000641757 987 ntBASIC16.97■□□□□ 0.31
SNX27Q96L92 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.97■□□□□ 0.31
SNX27Q96L92 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.97■□□□□ 0.31
SNX27Q96L92 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.97■□□□□ 0.31
SNX27Q96L92 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SNX27Q96L92 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.97■□□□□ 0.31
SNX27Q96L92 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.97■□□□□ 0.31
SNX27Q96L92 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms