Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 AC004890.2-204ENST00000481968 304 ntBASIC18.36■□□□□ 0.53
PGBD1Q96JS3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 AC011467.4-201ENST00000594891 528 ntBASIC18.36■□□□□ 0.53
PGBD1Q96JS3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PGBD1Q96JS3 LINC02228-204ENST00000642115 2962 ntBASIC18.36■□□□□ 0.53
PGBD1Q96JS3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 MRPS18AP1-201ENST00000414458 589 ntBASIC18.35■□□□□ 0.53
PGBD1Q96JS3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 AL844908.2-201ENST00000609461 460 ntBASIC18.35■□□□□ 0.53
PGBD1Q96JS3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PGBD1Q96JS3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 MIR661-201ENST00000384842 89 ntBASIC18.34■□□□□ 0.53
PGBD1Q96JS3 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 INGX-202ENST00000489074 768 ntBASIC18.34■□□□□ 0.53
PGBD1Q96JS3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PGBD1Q96JS3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms