Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 Z92544.3-201ENST00000624747 417 ntBASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 AC051619.7-201ENST00000568314 623 ntBASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 TEX28P1-201ENST00000613479 1221 ntBASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 TEX28P2-201ENST00000617764 1221 ntBASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 DBET-201ENST00000630918 3363 ntBASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 AC084364.1-201ENST00000551967 1556 ntBASIC15.41■□□□□ 0.06
PDLIM5Q96HC4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PDLIM5Q96HC4 SLED1-202ENST00000512051 380 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms