Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCAMP4Q969E2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCAMP4Q969E2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SCAMP4Q969E2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.67■□□□□ 0.1
SCAMP4Q969E2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SCAMP4Q969E2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCAMP4Q969E2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCAMP4Q969E2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 TOMM22P5-201ENST00000416399 439 ntBASIC15.66■□□□□ 0.1
SCAMP4Q969E2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 SPDYE22P-201ENST00000582158 798 ntBASIC15.66■□□□□ 0.1
SCAMP4Q969E2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 AL158212.4-201ENST00000624062 1286 ntBASIC15.66■□□□□ 0.1
SCAMP4Q969E2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 AC007950.2-201ENST00000615045 2347 ntBASIC15.66■□□□□ 0.1
SCAMP4Q969E2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SCAMP4Q969E2 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 AC055876.2-201ENST00000531834 546 ntBASIC15.65■□□□□ 0.1
SCAMP4Q969E2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 RARRES2P5-201ENST00000564013 466 ntBASIC15.65■□□□□ 0.1
SCAMP4Q969E2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 AL391069.4-201ENST00000609583 481 ntBASIC15.65■□□□□ 0.1
SCAMP4Q969E2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 CLK3P2-201ENST00000427566 1453 ntBASIC15.65■□□□□ 0.1
SCAMP4Q969E2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SCAMP4Q969E2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.64■□□□□ 0.1
SCAMP4Q969E2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SCAMP4Q969E2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.64■□□□□ 0.09
SCAMP4Q969E2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
SCAMP4Q969E2 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms