Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 AC010336.2-201ENST00000564226 506 ntBASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 AC063926.3-201ENST00000624734 5658 ntBASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CLDND2Q8NHS1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 ME2P1-201ENST00000426028 1970 ntBASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 AL139010.1-201ENST00000454878 894 ntBASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 AL132655.2-201ENST00000596276 594 ntBASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CLDND2Q8NHS1 BTBD7P1-201ENST00000447253 1453 ntBASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 KRT8P12-202ENST00000472924 1397 ntBASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDND2Q8NHS1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms