Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.08□□□□□ -0.32
CCDC168Q8NDH2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 AC138894.2-201ENST00000602838 371 ntBASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 BX539320.1-201ENST00000623759 877 ntBASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 SERF2-206ENST00000409291 807 ntTSL 3 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 AL354877.1-201ENST00000424412 413 ntBASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 RN7SL48P-201ENST00000579283 293 ntBASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 AC004899.1-201ENST00000424687 1714 ntBASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 HLA-A-202ENST00000376806 1854 ntBASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.07□□□□□ -0.32
CCDC168Q8NDH2 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 AC018695.7-201ENST00000624587 2492 ntBASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.06□□□□□ -0.32
CCDC168Q8NDH2 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms