Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 HAUS4P1-201ENST00000406739 1145 ntBASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 AC136604.1-201ENST00000418535 575 ntBASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 VDAC1P7-201ENST00000462417 847 ntBASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 AC108725.1-201ENST00000495472 409 ntBASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 AC008687.7-202ENST00000637404 953 ntBASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SYNPOQ8N3V7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 C2orf27AP3-201ENST00000434123 579 ntBASIC16■□□□□ 0.15
SYNPOQ8N3V7 AC093433.1-201ENST00000458048 571 ntBASIC16■□□□□ 0.15
SYNPOQ8N3V7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 AL354718.3-201ENST00000616414 581 ntBASIC16■□□□□ 0.15
SYNPOQ8N3V7 CR382287.1-201ENST00000623954 586 ntBASIC16■□□□□ 0.15
SYNPOQ8N3V7 AC068587.10-201ENST00000641210 219 ntBASIC16■□□□□ 0.15
SYNPOQ8N3V7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16■□□□□ 0.15
SYNPOQ8N3V7 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16■□□□□ 0.15
SYNPOQ8N3V7 AL662844.4-201ENST00000606367 2838 ntBASIC16■□□□□ 0.15
SYNPOQ8N3V7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 OR6D1P-203ENST00000641209 4860 ntBASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SYNPOQ8N3V7 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms