Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CHPFQ8IZ52 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHPFQ8IZ52 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
CHPFQ8IZ52 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.08■□□□□ 0.17
CHPFQ8IZ52 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.08■□□□□ 0.17
CHPFQ8IZ52 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHPFQ8IZ52 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHPFQ8IZ52 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.17
CHPFQ8IZ52 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHPFQ8IZ52 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHPFQ8IZ52 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CHPFQ8IZ52 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.08■□□□□ 0.17
CHPFQ8IZ52 REXO1L1P-202ENST00000608646 1974 ntBASIC16.08■□□□□ 0.16
CHPFQ8IZ52 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 AL442647.2-201ENST00000429864 857 ntBASIC16.08■□□□□ 0.16
CHPFQ8IZ52 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 PHKG1P2-201ENST00000457537 863 ntBASIC16.08■□□□□ 0.16
CHPFQ8IZ52 FAM86LP-201ENST00000478302 853 ntBASIC16.08■□□□□ 0.16
CHPFQ8IZ52 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 AC008741.2-201ENST00000612792 3115 ntBASIC16.08■□□□□ 0.16
CHPFQ8IZ52 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 KRT8P22-201ENST00000562317 1415 ntBASIC16.08■□□□□ 0.16
CHPFQ8IZ52 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CHPFQ8IZ52 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 AL162726.2-201ENST00000438986 1017 ntBASIC16.07■□□□□ 0.16
CHPFQ8IZ52 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.07■□□□□ 0.16
CHPFQ8IZ52 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.07■□□□□ 0.16
CHPFQ8IZ52 CU634019.7-201ENST00000624153 1185 ntBASIC16.07■□□□□ 0.16
CHPFQ8IZ52 FP236241.2-201ENST00000624906 1185 ntBASIC16.07■□□□□ 0.16
CHPFQ8IZ52 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 AC007950.2-201ENST00000615045 2347 ntBASIC16.07■□□□□ 0.16
CHPFQ8IZ52 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 AL662844.4-201ENST00000606367 2838 ntBASIC16.07■□□□□ 0.16
CHPFQ8IZ52 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CHPFQ8IZ52 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHPFQ8IZ52 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHPFQ8IZ52 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHPFQ8IZ52 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.06■□□□□ 0.16
CHPFQ8IZ52 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHPFQ8IZ52 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHPFQ8IZ52 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CHPFQ8IZ52 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CHPFQ8IZ52 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHPFQ8IZ52 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CHPFQ8IZ52 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
CHPFQ8IZ52 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms