Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.41
TRIM50Q86XT4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM50Q86XT4 AP003680.1-201ENST00000598970 3660 ntBASIC17.58■□□□□ 0.41
TRIM50Q86XT4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM50Q86XT4 AL121723.1-201ENST00000445194 1519 ntBASIC17.58■□□□□ 0.41
TRIM50Q86XT4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM50Q86XT4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM50Q86XT4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.58■□□□□ 0.4
TRIM50Q86XT4 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 ANKRD19P-201ENST00000338192 862 ntBASIC17.58■□□□□ 0.4
TRIM50Q86XT4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 AC015936.2-201ENST00000593177 259 ntBASIC17.58■□□□□ 0.4
TRIM50Q86XT4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.58■□□□□ 0.4
TRIM50Q86XT4 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 AC018665.1-201ENST00000622927 1362 ntBASIC17.57■□□□□ 0.4
TRIM50Q86XT4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 AL162726.2-201ENST00000438986 1017 ntBASIC17.57■□□□□ 0.4
TRIM50Q86XT4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 AC234783.1-201ENST00000441761 496 ntBASIC17.57■□□□□ 0.4
TRIM50Q86XT4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.57■□□□□ 0.4
TRIM50Q86XT4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRIM50Q86XT4 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.56■□□□□ 0.4
TRIM50Q86XT4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms