Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 KRT8P4-201ENST00000509735 1454 ntBASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 MSRA-203ENST00000441698 788 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 AL391280.1-201ENST00000506969 1062 ntBASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 AC022748.3-201ENST00000621828 275 ntBASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT28Q7Z3Y7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 AC006449.6-201ENST00000612330 2296 ntBASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 RPL17P11-201ENST00000417593 544 ntBASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 POM121L8P-201ENST00000417732 1281 ntBASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 AL354877.1-201ENST00000424412 413 ntBASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 POM121L9P-203ENST00000441984 1285 ntBASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 CHMP1AP1-201ENST00000445563 662 ntBASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 HIST2H2BB-201ENST00000449108 381 ntBASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 AC024681.1-201ENST00000521917 487 ntBASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 ZACNP1-201ENST00000612259 710 ntBASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 AL353726.2-201ENST00000623259 884 ntBASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT28Q7Z3Y7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
KRT28Q7Z3Y7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
KRT28Q7Z3Y7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC21.02■□□□□ 0.95
KRT28Q7Z3Y7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
KRT28Q7Z3Y7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC21.02■□□□□ 0.95
KRT28Q7Z3Y7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
KRT28Q7Z3Y7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
KRT28Q7Z3Y7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 DPM3-202ENST00000368399 517 ntBASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 MIR648-201ENST00000385046 94 ntBASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 ACTG1P2-201ENST00000415776 1125 ntBASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 ACTG1P11-201ENST00000425411 1125 ntBASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 NUP210P1-202ENST00000504322 710 ntBASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 AC005740.2-201ENST00000511085 419 ntBASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.01■□□□□ 0.95
KRT28Q7Z3Y7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT28Q7Z3Y7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms