Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 DRD5P1-201ENST00000456605 1438 ntBASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBE3BQ7Z3V4 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.58■□□□□ 0.73
UBE3BQ7Z3V4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE3BQ7Z3V4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE3BQ7Z3V4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.58■□□□□ 0.73
UBE3BQ7Z3V4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE3BQ7Z3V4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.58■□□□□ 0.73
UBE3BQ7Z3V4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
UBE3BQ7Z3V4 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE3BQ7Z3V4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE3BQ7Z3V4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBE3BQ7Z3V4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC19.58■□□□□ 0.73
UBE3BQ7Z3V4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 MIR1909-201ENST00000411312 80 ntBASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 ACTG1P3-201ENST00000431775 1114 ntBASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 AC007274.1-201ENST00000439805 662 ntBASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 BTNL10-201ENST00000595971 695 ntBASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 AC005252.2-201ENST00000624630 1141 ntBASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 AL391005.1-201ENST00000623953 2435 ntBASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.58■□□□□ 0.72
UBE3BQ7Z3V4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 PRAL-201ENST00000624952 3286 ntBASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 AC026410.3-201ENST00000514280 936 ntBASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 SLC25A47P1-201ENST00000531577 414 ntBASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 ENPP7P5-201ENST00000541031 1031 ntBASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 CLUHP6-201ENST00000580789 941 ntBASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 AC107373.2-201ENST00000607735 490 ntBASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 AC018665.1-201ENST00000622927 1362 ntBASIC19.57■□□□□ 0.72
UBE3BQ7Z3V4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 MSTO2P-201ENST00000314835 1709 ntBASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 AL139384.1-201ENST00000612143 3047 ntBASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 SNX29P1-201ENST00000548357 1007 ntBASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 AC233724.13-201ENST00000598383 410 ntBASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UBE3BQ7Z3V4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms