Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD3Q7Z3D4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 AL512638.1-201ENST00000457493 794 ntBASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 AC025048.3-201ENST00000590609 569 ntBASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 AC097359.3-201ENST00000603982 1210 ntBASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 AC005702.4-201ENST00000618393 416 ntBASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 AJ011932.1-201ENST00000621707 465 ntBASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD3Q7Z3D4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 AC136604.1-201ENST00000418535 575 ntBASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 AC009477.1-201ENST00000452936 217 ntBASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 AC044860.1-202ENST00000559481 777 ntBASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 AL109936.8-201ENST00000641772 604 ntBASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.9■□□□□ 0.14
LYSMD3Q7Z3D4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.14
LYSMD3Q7Z3D4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 AL607033.1-201ENST00000623900 1599 ntBASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LYSMD3Q7Z3D4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms