Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.37□□□□□ -0.11
SHFQ7M4L6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHFQ7M4L6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.36□□□□□ -0.11
SHFQ7M4L6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 IGHV3-22-201ENST00000520721 359 ntBASIC14.36□□□□□ -0.11
SHFQ7M4L6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 AC073439.1-201ENST00000624121 1774 ntBASIC14.36□□□□□ -0.11
SHFQ7M4L6 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.36□□□□□ -0.11
SHFQ7M4L6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SHFQ7M4L6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 AGAP7P-201ENST00000582299 2062 ntBASIC14.35□□□□□ -0.11
SHFQ7M4L6 AGAP14-201ENST00000624701 2060 ntBASIC14.35□□□□□ -0.11
SHFQ7M4L6 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 AL161645.1-201ENST00000622716 1255 ntBASIC14.35□□□□□ -0.11
SHFQ7M4L6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 PMS2P7-201ENST00000506558 1336 ntBASIC14.35□□□□□ -0.11
SHFQ7M4L6 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SHFQ7M4L6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.35□□□□□ -0.11
SHFQ7M4L6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms