Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 AC023141.5-201ENST00000458585 616 ntBASIC14.45□□□□□ -0.1
NIPAL3Q6P499 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 AC024267.1-201ENST00000582320 895 ntBASIC14.45□□□□□ -0.1
NIPAL3Q6P499 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 MIR4321-201ENST00000592276 80 ntBASIC14.45□□□□□ -0.1
NIPAL3Q6P499 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 LINC02228-204ENST00000642115 2962 ntBASIC14.45□□□□□ -0.1
NIPAL3Q6P499 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
NIPAL3Q6P499 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 AC134407.2-201ENST00000625089 1978 ntBASIC14.44□□□□□ -0.1
NIPAL3Q6P499 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 HLA-H-201ENST00000383620 1096 ntBASIC14.44□□□□□ -0.1
NIPAL3Q6P499 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 FAM58DP-201ENST00000428076 619 ntBASIC14.44□□□□□ -0.1
NIPAL3Q6P499 RBPMS2P1-201ENST00000437762 623 ntBASIC14.44□□□□□ -0.1
NIPAL3Q6P499 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 AC093520.2-201ENST00000561830 333 ntBASIC14.44□□□□□ -0.1
NIPAL3Q6P499 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 AC139530.3-201ENST00000620344 690 ntBASIC14.44□□□□□ -0.1
NIPAL3Q6P499 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 FAM45BP-202ENST00000592932 1624 ntBASIC14.44□□□□□ -0.1
NIPAL3Q6P499 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NIPAL3Q6P499 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NIPAL3Q6P499 AC126755.1-201ENST00000525846 6405 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms