Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 BNIP3P29-201ENST00000598302 571 ntBASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 AC011447.5-201ENST00000616168 564 ntBASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 RN7SL832P-201ENST00000607781 1756 ntBASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNFT1Q5M7Z0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 TNRC18P3-201ENST00000441896 2691 ntBASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 AC093433.1-201ENST00000458048 571 ntBASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 PTP4A1P2-201ENST00000546033 454 ntBASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 AL022328.1-201ENST00000610050 478 ntBASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 AC124067.4-201ENST00000519691 2379 ntBASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RNFT1Q5M7Z0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 AC069224.1-201ENST00000566372 1715 ntBASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 AC099398.1-201ENST00000567919 2776 ntBASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 AC005229.1-201ENST00000392885 409 ntBASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.16□□□□□ -0.14
RNFT1Q5M7Z0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms