Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
CHRFAM7AQ494W8 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.96□□□□□ -0.18
CHRFAM7AQ494W8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CHRFAM7AQ494W8 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHRFAM7AQ494W8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CHRFAM7AQ494W8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CHRFAM7AQ494W8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
CHRFAM7AQ494W8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CHRFAM7AQ494W8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 TREML5P-201ENST00000421694 576 ntBASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 HLA-V-201ENST00000429037 534 ntBASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 UGT1A2P-201ENST00000454886 866 ntBASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 RARRES2P8-201ENST00000566335 367 ntBASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 AC099522.2-201ENST00000607001 744 ntBASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 GPAA1P2-202ENST00000606848 1787 ntBASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 CDC14C-201ENST00000428251 1719 ntBASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 AC092850.2-201ENST00000623821 2697 ntBASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CHRFAM7AQ494W8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 AKAP8P1-201ENST00000434743 1349 ntBASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 MIR661-201ENST00000384842 89 ntBASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 AC073347.1-201ENST00000421633 2643 ntBASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 CRB3P1-201ENST00000449338 276 ntBASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 AL135744.1-201ENST00000565098 629 ntBASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 AL161645.1-201ENST00000622716 1255 ntBASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 AC022532.1-201ENST00000624563 1728 ntBASIC13.94□□□□□ -0.18
CHRFAM7AQ494W8 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms