Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.76□□□□□ -0.05
CD47Q08722 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.76□□□□□ -0.05
CD47Q08722 AL031432.2-201ENST00000566714 459 ntBASIC14.76□□□□□ -0.05
CD47Q08722 AL928711.1-201ENST00000570165 459 ntBASIC14.76□□□□□ -0.05
CD47Q08722 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.76□□□□□ -0.05
CD47Q08722 AL031055.1-201ENST00000606362 631 ntBASIC14.76□□□□□ -0.05
CD47Q08722 Z83851.2-201ENST00000609564 659 ntBASIC14.76□□□□□ -0.05
CD47Q08722 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.76□□□□□ -0.05
CD47Q08722 AL645728.2-201ENST00000641974 660 ntBASIC14.76□□□□□ -0.05
CD47Q08722 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.76□□□□□ -0.05
CD47Q08722 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CD47Q08722 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
CD47Q08722 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.76□□□□□ -0.05
CD47Q08722 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CD47Q08722 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CD47Q08722 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 KRT8P44-201ENST00000441609 1350 ntBASIC14.75□□□□□ -0.05
CD47Q08722 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CD47Q08722 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.75□□□□□ -0.05
CD47Q08722 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.75□□□□□ -0.05
CD47Q08722 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.75□□□□□ -0.05
CD47Q08722 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CD47Q08722 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CD47Q08722 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.75□□□□□ -0.05
CD47Q08722 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.75□□□□□ -0.05
CD47Q08722 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.75□□□□□ -0.05
CD47Q08722 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.75□□□□□ -0.05
CD47Q08722 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.75□□□□□ -0.05
CD47Q08722 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.75□□□□□ -0.05
CD47Q08722 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CD47Q08722 AC005840.4-201ENST00000541242 2494 ntBASIC14.75□□□□□ -0.05
CD47Q08722 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CD47Q08722 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CD47Q08722 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.75□□□□□ -0.05
CD47Q08722 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.75□□□□□ -0.05
CD47Q08722 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CD47Q08722 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CD47Q08722 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.75□□□□□ -0.05
CD47Q08722 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.74□□□□□ -0.05
CD47Q08722 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CD47Q08722 AL161772.1-201ENST00000610494 4412 ntBASIC14.74□□□□□ -0.05
CD47Q08722 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CD47Q08722 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.74□□□□□ -0.05
CD47Q08722 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.74□□□□□ -0.05
CD47Q08722 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.74□□□□□ -0.05
CD47Q08722 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CD47Q08722 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.74□□□□□ -0.05
CD47Q08722 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.74□□□□□ -0.05
CD47Q08722 RNU1-129P-201ENST00000384064 167 ntBASIC14.74□□□□□ -0.05
CD47Q08722 HMGA1P7-201ENST00000406908 502 ntBASIC14.74□□□□□ -0.05
CD47Q08722 IGLL3P-201ENST00000412472 434 ntBASIC14.74□□□□□ -0.05
CD47Q08722 HCG4B-203ENST00000450128 991 ntBASIC14.74□□□□□ -0.05
CD47Q08722 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
CD47Q08722 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.74□□□□□ -0.05
CD47Q08722 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CD47Q08722 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CD47Q08722 CD63-204ENST00000546939 779 ntTSL 3 BASIC14.74□□□□□ -0.05
CD47Q08722 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.74□□□□□ -0.05
CD47Q08722 U1.21-201ENST00000580816 167 ntBASIC14.74□□□□□ -0.05
CD47Q08722 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.74□□□□□ -0.05
CD47Q08722 AC021097.1-201ENST00000607902 574 ntBASIC14.74□□□□□ -0.05
CD47Q08722 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.74□□□□□ -0.05
CD47Q08722 AC010507.1-201ENST00000633895 436 ntBASIC14.74□□□□□ -0.05
CD47Q08722 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.74□□□□□ -0.05
CD47Q08722 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CD47Q08722 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CD47Q08722 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.74□□□□□ -0.05
CD47Q08722 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms