Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
SRPXP78539 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
SRPXP78539 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.08□□□□□ -0.31
SRPXP78539 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SRPXP78539 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SRPXP78539 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.08□□□□□ -0.32
SRPXP78539 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.08□□□□□ -0.32
SRPXP78539 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.08□□□□□ -0.32
SRPXP78539 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.08□□□□□ -0.32
SRPXP78539 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SRPXP78539 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
SRPXP78539 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.08□□□□□ -0.32
SRPXP78539 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.08□□□□□ -0.32
SRPXP78539 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.08□□□□□ -0.32
SRPXP78539 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 FAM8A3P-201ENST00000427218 844 ntBASIC13.08□□□□□ -0.32
SRPXP78539 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.08□□□□□ -0.32
SRPXP78539 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 CXCL1P1-201ENST00000502804 216 ntBASIC13.08□□□□□ -0.32
SRPXP78539 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.08□□□□□ -0.32
SRPXP78539 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
SRPXP78539 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.08□□□□□ -0.32
SRPXP78539 AC021087.4-201ENST00000563761 564 ntBASIC13.08□□□□□ -0.32
SRPXP78539 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.08□□□□□ -0.32
SRPXP78539 AL049597.2-201ENST00000565575 961 ntBASIC13.08□□□□□ -0.32
SRPXP78539 AC087388.1-201ENST00000571370 1112 ntBASIC13.08□□□□□ -0.32
SRPXP78539 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.08□□□□□ -0.32
SRPXP78539 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.08□□□□□ -0.32
SRPXP78539 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.08□□□□□ -0.32
SRPXP78539 AL078644.1-201ENST00000609881 752 ntBASIC13.08□□□□□ -0.32
SRPXP78539 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
SRPXP78539 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SRPXP78539 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SRPXP78539 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.08□□□□□ -0.32
SRPXP78539 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SRPXP78539 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.08□□□□□ -0.32
SRPXP78539 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SRPXP78539 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.07□□□□□ -0.32
SRPXP78539 ZBED1P1-201ENST00000502364 1930 ntBASIC13.07□□□□□ -0.32
SRPXP78539 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
SRPXP78539 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 ST20-AS1-201ENST00000560255 4223 ntBASIC13.07□□□□□ -0.32
SRPXP78539 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.07□□□□□ -0.32
SRPXP78539 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.07□□□□□ -0.32
SRPXP78539 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.07□□□□□ -0.32
SRPXP78539 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.07□□□□□ -0.32
SRPXP78539 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.07□□□□□ -0.32
SRPXP78539 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 AC005593.1-201ENST00000624894 515 ntBASIC13.07□□□□□ -0.32
SRPXP78539 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
SRPXP78539 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.07□□□□□ -0.32
SRPXP78539 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
SRPXP78539 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.07□□□□□ -0.32
SRPXP78539 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.07□□□□□ -0.32
SRPXP78539 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
SRPXP78539 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
SRPXP78539 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SRPXP78539 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.07□□□□□ -0.32
SRPXP78539 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SRPXP78539 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SRPXP78539 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms