Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TSSK5P-201ENST00000423978 907 ntBASIC15.42■□□□□ 0.06
YBX1P67809 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.42■□□□□ 0.06
YBX1P67809 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.42■□□□□ 0.06
YBX1P67809 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.42■□□□□ 0.06
YBX1P67809 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.42■□□□□ 0.06
YBX1P67809 HLA-V-204ENST00000476601 1289 ntBASIC15.42■□□□□ 0.06
YBX1P67809 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.42■□□□□ 0.06
YBX1P67809 AL512361.1-201ENST00000554200 418 ntBASIC15.42■□□□□ 0.06
YBX1P67809 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.42■□□□□ 0.06
YBX1P67809 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.42■□□□□ 0.06
YBX1P67809 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
YBX1P67809 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
YBX1P67809 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.42■□□□□ 0.06
YBX1P67809 AL355385.1-201ENST00000606123 409 ntBASIC15.42■□□□□ 0.06
YBX1P67809 AL158211.3-201ENST00000607385 239 ntBASIC15.42■□□□□ 0.06
YBX1P67809 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.42■□□□□ 0.06
YBX1P67809 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
YBX1P67809 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.42■□□□□ 0.06
YBX1P67809 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
YBX1P67809 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
YBX1P67809 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
YBX1P67809 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.42■□□□□ 0.06
YBX1P67809 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
YBX1P67809 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
YBX1P67809 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
YBX1P67809 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
YBX1P67809 KRT8P37-201ENST00000451609 1420 ntBASIC15.42■□□□□ 0.06
YBX1P67809 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
YBX1P67809 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
YBX1P67809 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
YBX1P67809 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.42■□□□□ 0.06
YBX1P67809 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
YBX1P67809 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
YBX1P67809 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
YBX1P67809 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.41■□□□□ 0.06
YBX1P67809 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.41■□□□□ 0.06
YBX1P67809 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
YBX1P67809 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
YBX1P67809 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
YBX1P67809 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.41■□□□□ 0.06
YBX1P67809 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.41■□□□□ 0.06
YBX1P67809 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.41■□□□□ 0.06
YBX1P67809 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
YBX1P67809 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.41■□□□□ 0.06
YBX1P67809 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.41■□□□□ 0.06
YBX1P67809 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
YBX1P67809 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.41■□□□□ 0.06
YBX1P67809 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
YBX1P67809 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.41■□□□□ 0.06
YBX1P67809 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
YBX1P67809 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
YBX1P67809 AC090616.6-203ENST00000579186 1945 ntBASIC15.41■□□□□ 0.06
YBX1P67809 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
YBX1P67809 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.41■□□□□ 0.06
YBX1P67809 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.4■□□□□ 0.06
YBX1P67809 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
YBX1P67809 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
YBX1P67809 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.4■□□□□ 0.06
YBX1P67809 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
YBX1P67809 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.4■□□□□ 0.06
YBX1P67809 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.4■□□□□ 0.06
YBX1P67809 AC093214.1-201ENST00000511688 1107 ntBASIC15.4■□□□□ 0.06
YBX1P67809 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.4■□□□□ 0.06
YBX1P67809 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.4■□□□□ 0.06
YBX1P67809 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.4■□□□□ 0.06
YBX1P67809 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.4■□□□□ 0.06
YBX1P67809 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.4■□□□□ 0.06
YBX1P67809 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms