Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.19□□□□□ -0.62
CKS1BP61024 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 SPDYE21P-201ENST00000413323 827 ntBASIC11.19□□□□□ -0.62
CKS1BP61024 LINC00982-205ENST00000420957 435 ntBASIC11.19□□□□□ -0.62
CKS1BP61024 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 AC104076.2-201ENST00000448912 469 ntBASIC11.19□□□□□ -0.62
CKS1BP61024 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
CKS1BP61024 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.19□□□□□ -0.62
CKS1BP61024 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC11.19□□□□□ -0.62
CKS1BP61024 AC013467.2-201ENST00000605472 835 ntBASIC11.19□□□□□ -0.62
CKS1BP61024 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CKS1BP61024 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
CKS1BP61024 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC11.19□□□□□ -0.62
CKS1BP61024 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 CICP16-201ENST00000502609 2813 ntBASIC11.19□□□□□ -0.62
CKS1BP61024 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
CKS1BP61024 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.19□□□□□ -0.62
CKS1BP61024 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
CKS1BP61024 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 INTS4P1-201ENST00000438455 1935 ntBASIC11.19□□□□□ -0.62
CKS1BP61024 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 AOC4P-203ENST00000566825 2289 ntBASIC11.19□□□□□ -0.62
CKS1BP61024 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
CKS1BP61024 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC11.19□□□□□ -0.62
CKS1BP61024 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
CKS1BP61024 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS1BP61024 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CKS1BP61024 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS1BP61024 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC11.18□□□□□ -0.62
CKS1BP61024 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC11.18□□□□□ -0.62
CKS1BP61024 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS1BP61024 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS1BP61024 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
CKS1BP61024 AC233702.3-201ENST00000578656 1387 ntBASIC11.18□□□□□ -0.62
CKS1BP61024 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.18□□□□□ -0.62
CKS1BP61024 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CKS1BP61024 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CKS1BP61024 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 AL596087.1-201ENST00000400979 1969 ntBASIC11.18□□□□□ -0.62
CKS1BP61024 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
CKS1BP61024 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 AC148477.5-201ENST00000625164 1645 ntBASIC11.18□□□□□ -0.62
CKS1BP61024 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC11.18□□□□□ -0.62
CKS1BP61024 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
CKS1BP61024 AP002414.1-201ENST00000391405 1147 ntBASIC11.18□□□□□ -0.62
CKS1BP61024 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
CKS1BP61024 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.18□□□□□ -0.62
CKS1BP61024 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
CKS1BP61024 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms