Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S2P59780 CICP14-201ENST00000629111 2732 ntBASIC13.64□□□□□ -0.23
AP3S2P59780 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AP3S2P59780 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AP3S2P59780 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
AP3S2P59780 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 AC023024.2-201ENST00000623561 1993 ntBASIC13.64□□□□□ -0.23
AP3S2P59780 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S2P59780 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
AP3S2P59780 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
AP3S2P59780 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.64□□□□□ -0.23
AP3S2P59780 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.64□□□□□ -0.23
AP3S2P59780 AL645939.2-201ENST00000427340 991 ntBASIC13.64□□□□□ -0.23
AP3S2P59780 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S2P59780 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.64□□□□□ -0.23
AP3S2P59780 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S2P59780 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 BNIP3P18-201ENST00000593976 575 ntBASIC13.64□□□□□ -0.23
AP3S2P59780 AC064862.7-201ENST00000604520 867 ntBASIC13.64□□□□□ -0.23
AP3S2P59780 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.64□□□□□ -0.23
AP3S2P59780 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.64□□□□□ -0.23
AP3S2P59780 AL022326.1-202ENST00000641533 845 ntBASIC13.64□□□□□ -0.23
AP3S2P59780 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP3S2P59780 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
AP3S2P59780 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S2P59780 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
AP3S2P59780 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
AP3S2P59780 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.64□□□□□ -0.23
AP3S2P59780 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.64□□□□□ -0.23
AP3S2P59780 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.64□□□□□ -0.23
AP3S2P59780 AC129492.6-201ENST00000611383 1305 ntBASIC13.64□□□□□ -0.23
AP3S2P59780 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AP3S2P59780 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
AP3S2P59780 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
AP3S2P59780 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
AP3S2P59780 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
AP3S2P59780 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
AP3S2P59780 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3S2P59780 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
AP3S2P59780 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.63□□□□□ -0.23
AP3S2P59780 POM121L3P-201ENST00000419331 1163 ntBASIC13.63□□□□□ -0.23
AP3S2P59780 AL137013.1-201ENST00000432946 1228 ntBASIC13.63□□□□□ -0.23
AP3S2P59780 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3S2P59780 SLC25A6P2-201ENST00000497974 877 ntBASIC13.63□□□□□ -0.23
AP3S2P59780 AC107918.2-201ENST00000530817 355 ntBASIC13.63□□□□□ -0.23
AP3S2P59780 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3S2P59780 NTF6B-201ENST00000591913 560 ntBASIC13.63□□□□□ -0.23
AP3S2P59780 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.63□□□□□ -0.23
AP3S2P59780 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.63□□□□□ -0.23
AP3S2P59780 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.63□□□□□ -0.23
AP3S2P59780 AL137784.3-201ENST00000623858 2288 ntBASIC13.63□□□□□ -0.23
AP3S2P59780 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.63□□□□□ -0.23
AP3S2P59780 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
AP3S2P59780 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
AP3S2P59780 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.63□□□□□ -0.23
AP3S2P59780 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
AP3S2P59780 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
AP3S2P59780 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms