Protein–RNA interactions for Protein: P58499

FAM3B, Protein FAM3B, humanhuman

Predicted RBP Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3BP58499 AJ011931.1-201ENST00000618749 2492 ntBASIC12.43□□□□□ -0.42
FAM3BP58499 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM3BP58499 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
FAM3BP58499 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
FAM3BP58499 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
FAM3BP58499 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.42□□□□□ -0.42
FAM3BP58499 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
FAM3BP58499 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.42□□□□□ -0.42
FAM3BP58499 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 AC103564.2-201ENST00000432853 1299 ntBASIC12.42□□□□□ -0.42
FAM3BP58499 FDX1P1-201ENST00000449115 551 ntBASIC12.42□□□□□ -0.42
FAM3BP58499 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.42□□□□□ -0.42
FAM3BP58499 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.42□□□□□ -0.42
FAM3BP58499 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.42□□□□□ -0.42
FAM3BP58499 AC009533.2-201ENST00000543664 586 ntBASIC12.42□□□□□ -0.42
FAM3BP58499 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.42□□□□□ -0.42
FAM3BP58499 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.42□□□□□ -0.42
FAM3BP58499 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.42□□□□□ -0.42
FAM3BP58499 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.42□□□□□ -0.42
FAM3BP58499 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.42□□□□□ -0.42
FAM3BP58499 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 AL121912.1-201ENST00000603683 238 ntBASIC12.42□□□□□ -0.42
FAM3BP58499 AC114341.1-201ENST00000618070 349 ntBASIC12.42□□□□□ -0.42
FAM3BP58499 SNX33P1-201ENST00000592116 1762 ntBASIC12.42□□□□□ -0.42
FAM3BP58499 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 LINC01144-201ENST00000626198 1710 ntBASIC12.42□□□□□ -0.42
FAM3BP58499 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
FAM3BP58499 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
FAM3BP58499 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.42□□□□□ -0.42
FAM3BP58499 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM3BP58499 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM3BP58499 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.41□□□□□ -0.42
FAM3BP58499 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.41□□□□□ -0.42
FAM3BP58499 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
FAM3BP58499 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.41□□□□□ -0.42
FAM3BP58499 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.41□□□□□ -0.42
FAM3BP58499 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.41□□□□□ -0.42
FAM3BP58499 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
FAM3BP58499 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.41□□□□□ -0.42
FAM3BP58499 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.41□□□□□ -0.42
FAM3BP58499 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
FAM3BP58499 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
FAM3BP58499 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.41□□□□□ -0.42
FAM3BP58499 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
FAM3BP58499 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
FAM3BP58499 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
FAM3BP58499 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC12.41□□□□□ -0.42
FAM3BP58499 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.41□□□□□ -0.42
FAM3BP58499 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.41□□□□□ -0.42
FAM3BP58499 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
FAM3BP58499 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.41□□□□□ -0.42
FAM3BP58499 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms