Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.19□□□□□ -0.3
RIPPLY3P57055 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AC011676.5-201ENST00000624864 2660 ntBASIC13.19□□□□□ -0.3
RIPPLY3P57055 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RIPPLY3P57055 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RIPPLY3P57055 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 C2orf27AP3-201ENST00000434123 579 ntBASIC13.18□□□□□ -0.3
RIPPLY3P57055 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 NOC2LP1-201ENST00000450578 752 ntBASIC13.18□□□□□ -0.3
RIPPLY3P57055 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 PRYP6-201ENST00000514804 343 ntBASIC13.18□□□□□ -0.3
RIPPLY3P57055 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 AC132192.2-201ENST00000596206 1147 ntBASIC13.18□□□□□ -0.3
RIPPLY3P57055 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 AL354718.3-201ENST00000616414 581 ntBASIC13.18□□□□□ -0.3
RIPPLY3P57055 CR382287.1-201ENST00000623954 586 ntBASIC13.18□□□□□ -0.3
RIPPLY3P57055 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 NKILA-202ENST00000614771 2598 ntBASIC13.18□□□□□ -0.3
RIPPLY3P57055 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RIPPLY3P57055 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.18□□□□□ -0.3
RIPPLY3P57055 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 LINC02228-204ENST00000642115 2962 ntBASIC13.17□□□□□ -0.3
RIPPLY3P57055 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RIPPLY3P57055 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC13.17□□□□□ -0.3
RIPPLY3P57055 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms