Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS2P54868 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS2P54868 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGCS2P54868 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.08■□□□□ 0.48
HMGCS2P54868 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS2P54868 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS2P54868 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS2P54868 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS2P54868 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
HMGCS2P54868 AL662844.4-201ENST00000606367 2838 ntBASIC18.08■□□□□ 0.48
HMGCS2P54868 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS2P54868 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGCS2P54868 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HMGCS2P54868 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HMGCS2P54868 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCS2P54868 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCS2P54868 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.07■□□□□ 0.48
HMGCS2P54868 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 AHCYP2-201ENST00000430630 1300 ntBASIC18.07■□□□□ 0.48
HMGCS2P54868 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
HMGCS2P54868 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC18.07■□□□□ 0.48
HMGCS2P54868 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.07■□□□□ 0.48
HMGCS2P54868 Z93015.1-201ENST00000451718 390 ntBASIC18.07■□□□□ 0.48
HMGCS2P54868 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HMGCS2P54868 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCS2P54868 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCS2P54868 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCS2P54868 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCS2P54868 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.07■□□□□ 0.48
HMGCS2P54868 BX539320.1-201ENST00000623759 877 ntBASIC18.07■□□□□ 0.48
HMGCS2P54868 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCS2P54868 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCS2P54868 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGCS2P54868 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCS2P54868 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
HMGCS2P54868 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGCS2P54868 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCS2P54868 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HMGCS2P54868 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.06■□□□□ 0.48
HMGCS2P54868 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HMGCS2P54868 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 MIR1202-201ENST00000408529 83 ntBASIC18.06■□□□□ 0.48
HMGCS2P54868 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
HMGCS2P54868 AC104306.2-201ENST00000451877 341 ntBASIC18.06■□□□□ 0.48
HMGCS2P54868 KRT8P13-201ENST00000463294 1010 ntBASIC18.06■□□□□ 0.48
HMGCS2P54868 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.06■□□□□ 0.48
HMGCS2P54868 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.06■□□□□ 0.48
HMGCS2P54868 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
HMGCS2P54868 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.06■□□□□ 0.48
HMGCS2P54868 AC132938.4-201ENST00000623835 848 ntBASIC18.06■□□□□ 0.48
HMGCS2P54868 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HMGCS2P54868 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCS2P54868 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGCS2P54868 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS2P54868 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS2P54868 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS2P54868 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS2P54868 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGCS2P54868 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS2P54868 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS2P54868 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCS2P54868 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms