Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.79■□□□□ 0.44
EPHB4P54760 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.79■□□□□ 0.44
EPHB4P54760 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.79■□□□□ 0.44
EPHB4P54760 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.79■□□□□ 0.44
EPHB4P54760 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.79■□□□□ 0.44
EPHB4P54760 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.79■□□□□ 0.44
EPHB4P54760 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
EPHB4P54760 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.79■□□□□ 0.44
EPHB4P54760 AC092337.1-201ENST00000568699 1129 ntBASIC17.79■□□□□ 0.44
EPHB4P54760 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EPHB4P54760 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
EPHB4P54760 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHB4P54760 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
EPHB4P54760 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHB4P54760 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHB4P54760 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.79■□□□□ 0.44
EPHB4P54760 AC092384.3-202ENST00000564646 2873 ntBASIC17.79■□□□□ 0.44
EPHB4P54760 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
EPHB4P54760 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
EPHB4P54760 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
EPHB4P54760 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
EPHB4P54760 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.79■□□□□ 0.44
EPHB4P54760 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.79■□□□□ 0.44
EPHB4P54760 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
EPHB4P54760 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHB4P54760 TUBB1P2-201ENST00000422712 1306 ntBASIC17.78■□□□□ 0.44
EPHB4P54760 TUBB1P1-201ENST00000503144 1300 ntBASIC17.78■□□□□ 0.44
EPHB4P54760 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHB4P54760 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHB4P54760 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHB4P54760 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.78■□□□□ 0.44
EPHB4P54760 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.78■□□□□ 0.44
EPHB4P54760 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHB4P54760 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.78■□□□□ 0.44
EPHB4P54760 KRT43P-201ENST00000434019 910 ntBASIC17.78■□□□□ 0.44
EPHB4P54760 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.78■□□□□ 0.44
EPHB4P54760 AL355994.2-201ENST00000447882 704 ntBASIC17.78■□□□□ 0.44
EPHB4P54760 SLC25A47P1-201ENST00000531577 414 ntBASIC17.78■□□□□ 0.44
EPHB4P54760 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.78■□□□□ 0.44
EPHB4P54760 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.78■□□□□ 0.44
EPHB4P54760 RRP7BP-205ENST00000566851 833 ntBASIC17.78■□□□□ 0.44
EPHB4P54760 AC233724.13-201ENST00000598383 410 ntBASIC17.78■□□□□ 0.44
EPHB4P54760 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
EPHB4P54760 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHB4P54760 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.78■□□□□ 0.44
EPHB4P54760 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
EPHB4P54760 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHB4P54760 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHB4P54760 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
EPHB4P54760 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHB4P54760 AC006538.1-201ENST00000567905 1585 ntBASIC17.78■□□□□ 0.44
EPHB4P54760 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.78■□□□□ 0.44
EPHB4P54760 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.78■□□□□ 0.44
EPHB4P54760 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.78■□□□□ 0.44
EPHB4P54760 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.78■□□□□ 0.44
EPHB4P54760 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.78■□□□□ 0.44
EPHB4P54760 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
EPHB4P54760 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
EPHB4P54760 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.77■□□□□ 0.44
EPHB4P54760 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.77■□□□□ 0.44
EPHB4P54760 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.77■□□□□ 0.44
EPHB4P54760 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.77■□□□□ 0.44
EPHB4P54760 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
EPHB4P54760 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
EPHB4P54760 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.77■□□□□ 0.44
EPHB4P54760 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
EPHB4P54760 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
EPHB4P54760 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
EPHB4P54760 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.77■□□□□ 0.44
EPHB4P54760 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
EPHB4P54760 BRWD1P1-201ENST00000401091 371 ntBASIC17.77■□□□□ 0.44
EPHB4P54760 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
EPHB4P54760 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 KLF2P4-201ENST00000451959 1225 ntBASIC17.77■□□□□ 0.44
EPHB4P54760 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.77■□□□□ 0.44
EPHB4P54760 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 AC061975.2-201ENST00000581722 295 ntBASIC17.77■□□□□ 0.44
EPHB4P54760 AC103810.3-201ENST00000583567 96 ntBASIC17.77■□□□□ 0.44
EPHB4P54760 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.77■□□□□ 0.44
EPHB4P54760 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
EPHB4P54760 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.77■□□□□ 0.44
EPHB4P54760 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EPHB4P54760 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.77■□□□□ 0.43
EPHB4P54760 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.77■□□□□ 0.43
EPHB4P54760 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
EPHB4P54760 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
EPHB4P54760 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
EPHB4P54760 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.77■□□□□ 0.43
EPHB4P54760 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.77■□□□□ 0.43
EPHB4P54760 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms