Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 SPDYE21P-201ENST00000413323 827 ntBASIC12.78□□□□□ -0.36
RAB5CP51148 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.78□□□□□ -0.36
RAB5CP51148 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC12.78□□□□□ -0.36
RAB5CP51148 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB5CP51148 TSPY20P-201ENST00000450910 630 ntBASIC12.78□□□□□ -0.36
RAB5CP51148 RN7SL606P-201ENST00000472779 293 ntBASIC12.78□□□□□ -0.36
RAB5CP51148 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.78□□□□□ -0.36
RAB5CP51148 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC12.78□□□□□ -0.36
RAB5CP51148 NAPSB-206ENST00000562112 1266 ntBASIC12.78□□□□□ -0.36
RAB5CP51148 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB5CP51148 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB5CP51148 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB5CP51148 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB5CP51148 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB5CP51148 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB5CP51148 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.78□□□□□ -0.36
RAB5CP51148 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RAB5CP51148 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB5CP51148 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.78□□□□□ -0.36
RAB5CP51148 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
RAB5CP51148 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
RAB5CP51148 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RAB5CP51148 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
RAB5CP51148 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC12.78□□□□□ -0.36
RAB5CP51148 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB5CP51148 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB5CP51148 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB5CP51148 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB5CP51148 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.77□□□□□ -0.36
RAB5CP51148 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB5CP51148 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
RAB5CP51148 AC099521.3-201ENST00000624251 2938 ntBASIC12.77□□□□□ -0.36
RAB5CP51148 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RAB5CP51148 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RAB5CP51148 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
RAB5CP51148 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.77□□□□□ -0.36
RAB5CP51148 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.77□□□□□ -0.37
RAB5CP51148 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
RAB5CP51148 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
RAB5CP51148 SPDYE15P-201ENST00000424157 909 ntBASIC12.77□□□□□ -0.37
RAB5CP51148 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 AC087641.1-201ENST00000557561 1021 ntBASIC12.77□□□□□ -0.37
RAB5CP51148 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.77□□□□□ -0.37
RAB5CP51148 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB5CP51148 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
RAB5CP51148 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
RAB5CP51148 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.77□□□□□ -0.37
RAB5CP51148 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB5CP51148 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 AP001282.1-201ENST00000531301 1499 ntBASIC12.77□□□□□ -0.37
RAB5CP51148 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB5CP51148 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.77□□□□□ -0.37
RAB5CP51148 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB5CP51148 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.37
RAB5CP51148 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
RAB5CP51148 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.77□□□□□ -0.37
RAB5CP51148 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms