Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.7■□□□□ 0.58
TNNI2P48788 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.7■□□□□ 0.58
TNNI2P48788 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TNNI2P48788 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.69■□□□□ 0.58
TNNI2P48788 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TNNI2P48788 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TNNI2P48788 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 AC026410.3-201ENST00000514280 936 ntBASIC18.69■□□□□ 0.58
TNNI2P48788 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 KRT90P-201ENST00000549264 1064 ntBASIC18.69■□□□□ 0.58
TNNI2P48788 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.69■□□□□ 0.58
TNNI2P48788 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.69■□□□□ 0.58
TNNI2P48788 AC103810.3-201ENST00000583567 96 ntBASIC18.69■□□□□ 0.58
TNNI2P48788 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.69■□□□□ 0.58
TNNI2P48788 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.69■□□□□ 0.58
TNNI2P48788 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TNNI2P48788 MSTO2P-201ENST00000314835 1709 ntBASIC18.69■□□□□ 0.58
TNNI2P48788 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.68■□□□□ 0.58
TNNI2P48788 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
TNNI2P48788 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.68■□□□□ 0.58
TNNI2P48788 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TNNI2P48788 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.68■□□□□ 0.58
TNNI2P48788 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 AC108725.1-201ENST00000495472 409 ntBASIC18.68■□□□□ 0.58
TNNI2P48788 AC022137.2-201ENST00000503482 481 ntBASIC18.68■□□□□ 0.58
TNNI2P48788 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.68■□□□□ 0.58
TNNI2P48788 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TNNI2P48788 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.68■□□□□ 0.58
TNNI2P48788 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.68■□□□□ 0.58
TNNI2P48788 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.68■□□□□ 0.58
TNNI2P48788 AC244669.2-201ENST00000612320 853 ntBASIC18.68■□□□□ 0.58
TNNI2P48788 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TNNI2P48788 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.68■□□□□ 0.58
TNNI2P48788 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.68■□□□□ 0.58
TNNI2P48788 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TNNI2P48788 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
TNNI2P48788 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
TNNI2P48788 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.67■□□□□ 0.58
TNNI2P48788 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.67■□□□□ 0.58
TNNI2P48788 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.67■□□□□ 0.58
TNNI2P48788 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TNNI2P48788 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.67■□□□□ 0.58
TNNI2P48788 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
TNNI2P48788 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.67■□□□□ 0.58
TNNI2P48788 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.67■□□□□ 0.58
TNNI2P48788 AC244093.1-201ENST00000610837 814 ntBASIC18.67■□□□□ 0.58
TNNI2P48788 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms