Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC027369.6-201ENST00000525520 931 ntBASIC15.22■□□□□ 0.03
SLC6A12P48065 ZNF890P-202ENST00000530367 1156 ntBASIC15.22■□□□□ 0.03
SLC6A12P48065 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC6A12P48065 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A12P48065 AL844908.2-201ENST00000609461 460 ntBASIC15.22■□□□□ 0.03
SLC6A12P48065 AC074044.1-201ENST00000609673 707 ntBASIC15.22■□□□□ 0.03
SLC6A12P48065 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC6A12P48065 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A12P48065 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A12P48065 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.22■□□□□ 0.03
SLC6A12P48065 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 AC084364.1-201ENST00000551967 1556 ntBASIC15.22■□□□□ 0.03
SLC6A12P48065 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A12P48065 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A12P48065 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SLC6A12P48065 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC6A12P48065 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC6A12P48065 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SLC6A12P48065 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC6A12P48065 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC6A12P48065 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC6A12P48065 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC6A12P48065 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC6A12P48065 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SLC6A12P48065 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC6A12P48065 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.21■□□□□ 0.03
SLC6A12P48065 TREML5P-201ENST00000421694 576 ntBASIC15.21■□□□□ 0.03
SLC6A12P48065 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC6A12P48065 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC6A12P48065 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC6A12P48065 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC6A12P48065 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SLC6A12P48065 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC6A12P48065 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC6A12P48065 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SLC6A12P48065 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SLC6A12P48065 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SLC6A12P48065 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC6A12P48065 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC6A12P48065 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC6A12P48065 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC6A12P48065 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.21■□□□□ 0.02
SLC6A12P48065 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC6A12P48065 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC6A12P48065 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC6A12P48065 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A12P48065 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SLC6A12P48065 AC006058.4-201ENST00000624016 1670 ntBASIC15.2■□□□□ 0.02
SLC6A12P48065 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC6A12P48065 AC015922.1-201ENST00000421102 1152 ntBASIC15.2■□□□□ 0.02
SLC6A12P48065 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC6A12P48065 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
SLC6A12P48065 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A12P48065 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC6A12P48065 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC6A12P48065 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC6A12P48065 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC6A12P48065 LINC01115-203ENST00000606068 577 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms