Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AC106028.4-201ENST00000614509 607 ntBASIC14.3□□□□□ -0.12
APOBEC1P41238 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.3□□□□□ -0.12
APOBEC1P41238 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.3□□□□□ -0.12
APOBEC1P41238 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOBEC1P41238 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.3□□□□□ -0.12
APOBEC1P41238 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOBEC1P41238 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOBEC1P41238 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
APOBEC1P41238 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.3□□□□□ -0.12
APOBEC1P41238 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
APOBEC1P41238 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
APOBEC1P41238 AC067930.6-201ENST00000623257 4947 ntBASIC14.3□□□□□ -0.12
APOBEC1P41238 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.29□□□□□ -0.12
APOBEC1P41238 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
APOBEC1P41238 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.29□□□□□ -0.12
APOBEC1P41238 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 AC105250.1-201ENST00000509378 2057 ntBASIC14.29□□□□□ -0.12
APOBEC1P41238 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
APOBEC1P41238 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
APOBEC1P41238 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.29□□□□□ -0.12
APOBEC1P41238 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.29□□□□□ -0.12
APOBEC1P41238 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.29□□□□□ -0.12
APOBEC1P41238 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.29□□□□□ -0.12
APOBEC1P41238 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.29□□□□□ -0.12
APOBEC1P41238 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.29□□□□□ -0.12
APOBEC1P41238 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.29□□□□□ -0.12
APOBEC1P41238 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.29□□□□□ -0.12
APOBEC1P41238 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
APOBEC1P41238 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
APOBEC1P41238 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.29□□□□□ -0.12
APOBEC1P41238 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.29□□□□□ -0.12
APOBEC1P41238 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
APOBEC1P41238 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBEC1P41238 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBEC1P41238 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.28□□□□□ -0.12
APOBEC1P41238 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBEC1P41238 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms