Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.34■□□□□ 0.37
USP8P40818 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.34■□□□□ 0.37
USP8P40818 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 MIR4469-201ENST00000583919 79 ntBASIC17.34■□□□□ 0.37
USP8P40818 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.34■□□□□ 0.37
USP8P40818 AC134407.2-201ENST00000625089 1978 ntBASIC17.34■□□□□ 0.37
USP8P40818 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.34■□□□□ 0.37
USP8P40818 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP8P40818 CICP13-201ENST00000422015 2789 ntBASIC17.34■□□□□ 0.37
USP8P40818 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
USP8P40818 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC17.33■□□□□ 0.37
USP8P40818 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
USP8P40818 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP8P40818 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP8P40818 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP8P40818 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP8P40818 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.33■□□□□ 0.37
USP8P40818 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP8P40818 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
USP8P40818 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP8P40818 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.33■□□□□ 0.36
USP8P40818 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP8P40818 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP8P40818 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP8P40818 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
USP8P40818 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.33■□□□□ 0.36
USP8P40818 BX842568.4-201ENST00000421222 227 ntBASIC17.33■□□□□ 0.36
USP8P40818 AC005237.2-201ENST00000434368 219 ntBASIC17.33■□□□□ 0.36
USP8P40818 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.33■□□□□ 0.36
USP8P40818 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.33■□□□□ 0.36
USP8P40818 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.33■□□□□ 0.36
USP8P40818 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.33■□□□□ 0.36
USP8P40818 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.33■□□□□ 0.36
USP8P40818 LINC01225-203ENST00000563550 1244 ntBASIC17.33■□□□□ 0.36
USP8P40818 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.33■□□□□ 0.36
USP8P40818 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.33■□□□□ 0.36
USP8P40818 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
USP8P40818 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
USP8P40818 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
USP8P40818 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
USP8P40818 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP8P40818 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
USP8P40818 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP8P40818 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP8P40818 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
USP8P40818 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
USP8P40818 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP8P40818 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP8P40818 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.32■□□□□ 0.36
USP8P40818 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.32■□□□□ 0.36
USP8P40818 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
USP8P40818 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.32■□□□□ 0.36
USP8P40818 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
USP8P40818 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.32■□□□□ 0.36
USP8P40818 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.32■□□□□ 0.36
USP8P40818 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
USP8P40818 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.32■□□□□ 0.36
USP8P40818 AC069335.1-201ENST00000489972 472 ntBASIC17.32■□□□□ 0.36
USP8P40818 AC112482.1-201ENST00000492080 688 ntBASIC17.32■□□□□ 0.36
USP8P40818 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.32■□□□□ 0.36
USP8P40818 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.32■□□□□ 0.36
USP8P40818 SLC25A39P2-201ENST00000537614 270 ntBASIC17.32■□□□□ 0.36
USP8P40818 AC092865.5-201ENST00000545435 363 ntBASIC17.32■□□□□ 0.36
USP8P40818 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.32■□□□□ 0.36
USP8P40818 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.32■□□□□ 0.36
USP8P40818 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
USP8P40818 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.32■□□□□ 0.36
USP8P40818 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.32■□□□□ 0.36
USP8P40818 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
USP8P40818 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC17.32■□□□□ 0.36
USP8P40818 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC17.32■□□□□ 0.36
USP8P40818 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP8P40818 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms