Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
CTNNA1P35221 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.77■□□□□ 0.27
CTNNA1P35221 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTNNA1P35221 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTNNA1P35221 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTNNA1P35221 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTNNA1P35221 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTNNA1P35221 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTNNA1P35221 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTNNA1P35221 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTNNA1P35221 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CTNNA1P35221 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.76■□□□□ 0.27
CTNNA1P35221 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.76■□□□□ 0.27
CTNNA1P35221 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.76■□□□□ 0.27
CTNNA1P35221 AL355306.1-201ENST00000415580 579 ntBASIC16.76■□□□□ 0.27
CTNNA1P35221 AC142381.1-201ENST00000426099 345 ntBASIC16.76■□□□□ 0.27
CTNNA1P35221 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.76■□□□□ 0.27
CTNNA1P35221 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.76■□□□□ 0.27
CTNNA1P35221 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CTNNA1P35221 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.76■□□□□ 0.27
CTNNA1P35221 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.76■□□□□ 0.27
CTNNA1P35221 AL135744.1-201ENST00000565098 629 ntBASIC16.76■□□□□ 0.27
CTNNA1P35221 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.76■□□□□ 0.27
CTNNA1P35221 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.76■□□□□ 0.27
CTNNA1P35221 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.76■□□□□ 0.27
CTNNA1P35221 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.76■□□□□ 0.27
CTNNA1P35221 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.76■□□□□ 0.27
CTNNA1P35221 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.76■□□□□ 0.27
CTNNA1P35221 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.76■□□□□ 0.27
CTNNA1P35221 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 REXO1L1P-202ENST00000608646 1974 ntBASIC16.76■□□□□ 0.27
CTNNA1P35221 AC112693.3-201ENST00000624819 1983 ntBASIC16.76■□□□□ 0.27
CTNNA1P35221 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CTNNA1P35221 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 AC023908.3-201ENST00000564211 3047 ntBASIC16.76■□□□□ 0.27
CTNNA1P35221 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 AC009090.5-201ENST00000624886 2285 ntBASIC16.76■□□□□ 0.27
CTNNA1P35221 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CTNNA1P35221 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.76■□□□□ 0.27
CTNNA1P35221 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTNNA1P35221 PCDHA3-202ENST00000532566 4594 ntBASIC16.75■□□□□ 0.27
CTNNA1P35221 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CTNNA1P35221 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.75■□□□□ 0.27
CTNNA1P35221 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.75■□□□□ 0.27
CTNNA1P35221 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CTNNA1P35221 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.75■□□□□ 0.27
CTNNA1P35221 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CTNNA1P35221 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.75■□□□□ 0.27
CTNNA1P35221 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.75■□□□□ 0.27
CTNNA1P35221 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.75■□□□□ 0.27
CTNNA1P35221 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CTNNA1P35221 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.75■□□□□ 0.27
CTNNA1P35221 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 RPS8P6-201ENST00000426177 609 ntBASIC16.75■□□□□ 0.27
CTNNA1P35221 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.75■□□□□ 0.27
CTNNA1P35221 RNA5SP416-201ENST00000516838 111 ntBASIC16.75■□□□□ 0.27
CTNNA1P35221 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 MIR4313-201ENST00000580760 101 ntBASIC16.75■□□□□ 0.27
CTNNA1P35221 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CTNNA1P35221 AC008267.7-201ENST00000624570 1194 ntBASIC16.75■□□□□ 0.27
CTNNA1P35221 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CTNNA1P35221 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.75■□□□□ 0.27
CTNNA1P35221 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CTNNA1P35221 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CTNNA1P35221 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.75■□□□□ 0.27
CTNNA1P35221 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.75■□□□□ 0.27
CTNNA1P35221 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CTNNA1P35221 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.75■□□□□ 0.27
CTNNA1P35221 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTNNA1P35221 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
CTNNA1P35221 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.74■□□□□ 0.27
CTNNA1P35221 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTNNA1P35221 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTNNA1P35221 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTNNA1P35221 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms