Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.58□□□□□ -0.24
TNFSF4P23510 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.58□□□□□ -0.24
TNFSF4P23510 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.58□□□□□ -0.24
TNFSF4P23510 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.58□□□□□ -0.24
TNFSF4P23510 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.58□□□□□ -0.24
TNFSF4P23510 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.58□□□□□ -0.24
TNFSF4P23510 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.58□□□□□ -0.24
TNFSF4P23510 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.58□□□□□ -0.24
TNFSF4P23510 AC005498.2-205ENST00000593218 784 ntBASIC13.58□□□□□ -0.24
TNFSF4P23510 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 AL590560.3-201ENST00000623350 461 ntBASIC13.58□□□□□ -0.24
TNFSF4P23510 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.58□□□□□ -0.24
TNFSF4P23510 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.58□□□□□ -0.24
TNFSF4P23510 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
TNFSF4P23510 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.58□□□□□ -0.24
TNFSF4P23510 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
TNFSF4P23510 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
TNFSF4P23510 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.58□□□□□ -0.24
TNFSF4P23510 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
TNFSF4P23510 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.58□□□□□ -0.24
TNFSF4P23510 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TNFSF4P23510 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
TNFSF4P23510 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.57□□□□□ -0.24
TNFSF4P23510 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.57□□□□□ -0.24
TNFSF4P23510 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.57□□□□□ -0.24
TNFSF4P23510 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.57□□□□□ -0.24
TNFSF4P23510 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.57□□□□□ -0.24
TNFSF4P23510 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.57□□□□□ -0.24
TNFSF4P23510 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.57□□□□□ -0.24
TNFSF4P23510 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.57□□□□□ -0.24
TNFSF4P23510 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
TNFSF4P23510 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
TNFSF4P23510 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.57□□□□□ -0.24
TNFSF4P23510 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.57□□□□□ -0.24
TNFSF4P23510 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.57□□□□□ -0.24
TNFSF4P23510 AL450472.2-201ENST00000603663 1156 ntBASIC13.57□□□□□ -0.24
TNFSF4P23510 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TNFSF4P23510 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.57□□□□□ -0.24
TNFSF4P23510 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.57□□□□□ -0.24
TNFSF4P23510 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.57□□□□□ -0.24
TNFSF4P23510 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
TNFSF4P23510 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.57□□□□□ -0.24
TNFSF4P23510 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.57□□□□□ -0.24
TNFSF4P23510 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.57□□□□□ -0.24
TNFSF4P23510 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
TNFSF4P23510 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
TNFSF4P23510 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.57□□□□□ -0.24
TNFSF4P23510 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TNFSF4P23510 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.56□□□□□ -0.24
TNFSF4P23510 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.56□□□□□ -0.24
TNFSF4P23510 REXO1L1P-202ENST00000608646 1974 ntBASIC13.56□□□□□ -0.24
TNFSF4P23510 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TNFSF4P23510 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.56□□□□□ -0.24
TNFSF4P23510 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TNFSF4P23510 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.56□□□□□ -0.24
TNFSF4P23510 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms