Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.6■□□□□ 0.41
COL11A1P12107 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL11A1P12107 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL11A1P12107 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.6■□□□□ 0.41
COL11A1P12107 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.6■□□□□ 0.41
COL11A1P12107 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.6■□□□□ 0.41
COL11A1P12107 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL11A1P12107 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.6■□□□□ 0.41
COL11A1P12107 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.6■□□□□ 0.41
COL11A1P12107 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.6■□□□□ 0.41
COL11A1P12107 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 AC004466.1-201ENST00000599515 1080 ntBASIC17.6■□□□□ 0.41
COL11A1P12107 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
COL11A1P12107 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
COL11A1P12107 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.6■□□□□ 0.41
COL11A1P12107 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
COL11A1P12107 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.59■□□□□ 0.41
COL11A1P12107 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COL11A1P12107 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.59■□□□□ 0.41
COL11A1P12107 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
COL11A1P12107 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.59■□□□□ 0.41
COL11A1P12107 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.59■□□□□ 0.41
COL11A1P12107 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.59■□□□□ 0.41
COL11A1P12107 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.59■□□□□ 0.41
COL11A1P12107 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC17.59■□□□□ 0.41
COL11A1P12107 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.59■□□□□ 0.41
COL11A1P12107 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.59■□□□□ 0.41
COL11A1P12107 DUX4L47-201ENST00000566374 394 ntBASIC17.59■□□□□ 0.41
COL11A1P12107 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.59■□□□□ 0.41
COL11A1P12107 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.59■□□□□ 0.41
COL11A1P12107 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.59■□□□□ 0.41
COL11A1P12107 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
COL11A1P12107 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
COL11A1P12107 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 REXO1L4P-201ENST00000605109 1937 ntBASIC17.59■□□□□ 0.41
COL11A1P12107 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COL11A1P12107 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
COL11A1P12107 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.59■□□□□ 0.41
COL11A1P12107 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
COL11A1P12107 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL11A1P12107 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL11A1P12107 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL11A1P12107 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
COL11A1P12107 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
COL11A1P12107 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.58■□□□□ 0.41
COL11A1P12107 AL645937.2-201ENST00000396808 931 ntBASIC17.58■□□□□ 0.41
COL11A1P12107 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.58■□□□□ 0.41
COL11A1P12107 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
COL11A1P12107 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.58■□□□□ 0.41
COL11A1P12107 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
COL11A1P12107 ENPP7P14-201ENST00000621765 1040 ntBASIC17.58■□□□□ 0.41
COL11A1P12107 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
COL11A1P12107 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
COL11A1P12107 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL11A1P12107 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
COL11A1P12107 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
COL11A1P12107 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.58■□□□□ 0.41
COL11A1P12107 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.58■□□□□ 0.4
COL11A1P12107 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
COL11A1P12107 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms