Protein–RNA interactions for Protein: P0CW24

PNMA6A, Paraneoplastic antigen-like protein 6A, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6AP0CW24 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PNMA6AP0CW24 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 HTR5BP-201ENST00000430851 1154 ntBASIC17.34■□□□□ 0.37
PNMA6AP0CW24 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 AC061975.2-201ENST00000581722 295 ntBASIC17.34■□□□□ 0.37
PNMA6AP0CW24 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 AC026120.1-201ENST00000611536 926 ntBASIC17.34■□□□□ 0.37
PNMA6AP0CW24 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.34■□□□□ 0.37
PNMA6AP0CW24 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PNMA6AP0CW24 AL137784.3-201ENST00000623858 2288 ntBASIC17.33■□□□□ 0.37
PNMA6AP0CW24 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PNMA6AP0CW24 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 SPDYE11-202ENST00000450699 704 ntBASIC17.33■□□□□ 0.36
PNMA6AP0CW24 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 AP000842.3-202ENST00000569238 1080 ntBASIC17.33■□□□□ 0.36
PNMA6AP0CW24 SPDYE9P-201ENST00000570642 692 ntBASIC17.33■□□□□ 0.36
PNMA6AP0CW24 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 SPDYE10P-202ENST00000612005 668 ntBASIC17.33■□□□□ 0.36
PNMA6AP0CW24 SPDYE8P-202ENST00000612377 668 ntBASIC17.33■□□□□ 0.36
PNMA6AP0CW24 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PNMA6AP0CW24 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.32■□□□□ 0.36
PNMA6AP0CW24 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.32■□□□□ 0.36
PNMA6AP0CW24 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms