Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 AC074338.1-201ENST00000416825 156 ntBASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 AC112492.5-201ENST00000421897 457 ntBASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 MIR6805-201ENST00000615055 62 ntBASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
RAB40ALP0C0E4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 AC007274.1-201ENST00000439805 662 ntBASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40ALP0C0E4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 AC079328.2-201ENST00000561241 3354 ntBASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40ALP0C0E4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms