Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.35□□□□□ -0.11
FREM3P0C091 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.34□□□□□ -0.11
FREM3P0C091 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.34□□□□□ -0.11
FREM3P0C091 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.34□□□□□ -0.11
FREM3P0C091 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 AL596257.1-201ENST00000641463 2694 ntBASIC14.34□□□□□ -0.11
FREM3P0C091 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.34□□□□□ -0.11
FREM3P0C091 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
FREM3P0C091 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.34□□□□□ -0.11
FREM3P0C091 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
FREM3P0C091 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.34□□□□□ -0.11
FREM3P0C091 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FREM3P0C091 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
FREM3P0C091 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
FREM3P0C091 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
FREM3P0C091 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
FREM3P0C091 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.34□□□□□ -0.11
FREM3P0C091 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.33□□□□□ -0.11
FREM3P0C091 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.33□□□□□ -0.11
FREM3P0C091 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
FREM3P0C091 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
FREM3P0C091 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FREM3P0C091 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.33□□□□□ -0.11
FREM3P0C091 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.33□□□□□ -0.11
FREM3P0C091 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.33□□□□□ -0.11
FREM3P0C091 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.33□□□□□ -0.11
FREM3P0C091 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.33□□□□□ -0.11
FREM3P0C091 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.11
FREM3P0C091 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
FREM3P0C091 AC008735.3-201ENST00000596646 500 ntBASIC14.33□□□□□ -0.11
FREM3P0C091 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FREM3P0C091 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
FREM3P0C091 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
FREM3P0C091 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
FREM3P0C091 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.33□□□□□ -0.12
FREM3P0C091 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
FREM3P0C091 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 AC092850.2-201ENST00000623821 2697 ntBASIC14.33□□□□□ -0.12
FREM3P0C091 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 COX5BP8-201ENST00000416911 349 ntBASIC14.33□□□□□ -0.12
FREM3P0C091 AC136604.1-201ENST00000418535 575 ntBASIC14.33□□□□□ -0.12
FREM3P0C091 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
FREM3P0C091 USP32P1-208ENST00000506594 1164 ntBASIC14.33□□□□□ -0.12
FREM3P0C091 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.33□□□□□ -0.12
FREM3P0C091 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.33□□□□□ -0.12
FREM3P0C091 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
FREM3P0C091 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
FREM3P0C091 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM3P0C091 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
FREM3P0C091 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
FREM3P0C091 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
FREM3P0C091 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.32□□□□□ -0.12
FREM3P0C091 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
FREM3P0C091 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.32□□□□□ -0.12
FREM3P0C091 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM3P0C091 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.32□□□□□ -0.12
FREM3P0C091 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms