Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN1P07384 AC022532.1-201ENST00000624563 1728 ntBASIC15.64■□□□□ 0.09
CAPN1P07384 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN1P07384 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN1P07384 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.64■□□□□ 0.09
CAPN1P07384 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.64■□□□□ 0.09
CAPN1P07384 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CAPN1P07384 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
CAPN1P07384 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 CICP13-201ENST00000422015 2789 ntBASIC15.64■□□□□ 0.09
CAPN1P07384 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CAPN1P07384 NORAD-201ENST00000565493 5339 ntBASIC15.64■□□□□ 0.09
CAPN1P07384 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN1P07384 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN1P07384 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN1P07384 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CAPN1P07384 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN1P07384 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CAPN1P07384 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.63■□□□□ 0.09
CAPN1P07384 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
CAPN1P07384 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CAPN1P07384 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN1P07384 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CAPN1P07384 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN1P07384 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.63■□□□□ 0.09
CAPN1P07384 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 SPDYE7P-202ENST00000420373 878 ntBASIC15.63■□□□□ 0.09
CAPN1P07384 AC107890.1-201ENST00000422478 521 ntBASIC15.63■□□□□ 0.09
CAPN1P07384 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.63■□□□□ 0.09
CAPN1P07384 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.63■□□□□ 0.09
CAPN1P07384 AC093214.1-201ENST00000511688 1107 ntBASIC15.63■□□□□ 0.09
CAPN1P07384 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.63■□□□□ 0.09
CAPN1P07384 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.63■□□□□ 0.09
CAPN1P07384 AC140878.1-201ENST00000565277 250 ntBASIC15.63■□□□□ 0.09
CAPN1P07384 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.63■□□□□ 0.09
CAPN1P07384 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.63■□□□□ 0.09
CAPN1P07384 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.63■□□□□ 0.09
CAPN1P07384 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.63■□□□□ 0.09
CAPN1P07384 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.63■□□□□ 0.09
CAPN1P07384 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 AC134407.2-201ENST00000625089 1978 ntBASIC15.63■□□□□ 0.09
CAPN1P07384 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CAPN1P07384 AP001282.1-201ENST00000531301 1499 ntBASIC15.63■□□□□ 0.09
CAPN1P07384 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.63■□□□□ 0.09
CAPN1P07384 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN1P07384 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CAPN1P07384 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CAPN1P07384 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.63■□□□□ 0.09
CAPN1P07384 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 FO538757.1-201ENST00000623083 1397 ntBASIC15.62■□□□□ 0.09
CAPN1P07384 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.62■□□□□ 0.09
CAPN1P07384 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN1P07384 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CAPN1P07384 PPT1-215ENST00000641471 2368 ntBASIC15.62■□□□□ 0.09
CAPN1P07384 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.62■□□□□ 0.09
CAPN1P07384 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN1P07384 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CAPN1P07384 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.62■□□□□ 0.09
CAPN1P07384 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.62■□□□□ 0.09
CAPN1P07384 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN1P07384 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN1P07384 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.62■□□□□ 0.09
CAPN1P07384 AC125807.1-201ENST00000483097 614 ntBASIC15.62■□□□□ 0.09
CAPN1P07384 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CAPN1P07384 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms