Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.81■□□□□ 0.44
TPM3P06753 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
TPM3P06753 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TPM3P06753 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TPM3P06753 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TPM3P06753 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TPM3P06753 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
TPM3P06753 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
TPM3P06753 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TPM3P06753 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TPM3P06753 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM3P06753 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.8■□□□□ 0.44
TPM3P06753 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM3P06753 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TPM3P06753 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
TPM3P06753 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM3P06753 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TPM3P06753 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM3P06753 AL031432.2-201ENST00000566714 459 ntBASIC17.8■□□□□ 0.44
TPM3P06753 AL928711.1-201ENST00000570165 459 ntBASIC17.8■□□□□ 0.44
TPM3P06753 AC005593.1-201ENST00000624894 515 ntBASIC17.8■□□□□ 0.44
TPM3P06753 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TPM3P06753 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM3P06753 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
TPM3P06753 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
TPM3P06753 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TPM3P06753 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM3P06753 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.8■□□□□ 0.44
TPM3P06753 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TPM3P06753 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.79■□□□□ 0.44
TPM3P06753 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.79■□□□□ 0.44
TPM3P06753 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TPM3P06753 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TPM3P06753 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.79■□□□□ 0.44
TPM3P06753 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.79■□□□□ 0.44
TPM3P06753 HMGA1P7-201ENST00000406908 502 ntBASIC17.79■□□□□ 0.44
TPM3P06753 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.79■□□□□ 0.44
TPM3P06753 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.79■□□□□ 0.44
TPM3P06753 AC073648.2-201ENST00000510116 352 ntBASIC17.79■□□□□ 0.44
TPM3P06753 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.79■□□□□ 0.44
TPM3P06753 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.79■□□□□ 0.44
TPM3P06753 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.79■□□□□ 0.44
TPM3P06753 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.79■□□□□ 0.44
TPM3P06753 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TPM3P06753 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.79■□□□□ 0.44
TPM3P06753 ACTL9-202ENST00000612068 1252 ntBASIC17.79■□□□□ 0.44
TPM3P06753 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
TPM3P06753 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TPM3P06753 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TPM3P06753 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TPM3P06753 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.79■□□□□ 0.44
TPM3P06753 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.79■□□□□ 0.44
TPM3P06753 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
TPM3P06753 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
TPM3P06753 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
TPM3P06753 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TPM3P06753 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms