Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.19□□□□□ -0.14
APOA1P02647 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
APOA1P02647 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
APOA1P02647 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.19□□□□□ -0.14
APOA1P02647 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.19□□□□□ -0.14
APOA1P02647 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.19□□□□□ -0.14
APOA1P02647 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 AC131009.4-201ENST00000624048 1740 ntBASIC14.19□□□□□ -0.14
APOA1P02647 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.19□□□□□ -0.14
APOA1P02647 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
APOA1P02647 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.19□□□□□ -0.14
APOA1P02647 BX664615.1-201ENST00000443558 458 ntBASIC14.19□□□□□ -0.14
APOA1P02647 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.19□□□□□ -0.14
APOA1P02647 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.19□□□□□ -0.14
APOA1P02647 AC145285.6-201ENST00000604632 637 ntBASIC14.19□□□□□ -0.14
APOA1P02647 AC139887.4-201ENST00000607877 719 ntBASIC14.19□□□□□ -0.14
APOA1P02647 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
APOA1P02647 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.19□□□□□ -0.14
APOA1P02647 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.19□□□□□ -0.14
APOA1P02647 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
APOA1P02647 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
APOA1P02647 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.19□□□□□ -0.14
APOA1P02647 TP73-AS1-210ENST00000637775 1455 ntBASIC14.18□□□□□ -0.14
APOA1P02647 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.18□□□□□ -0.14
APOA1P02647 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
APOA1P02647 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC14.18□□□□□ -0.14
APOA1P02647 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
APOA1P02647 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
APOA1P02647 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.18□□□□□ -0.14
APOA1P02647 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
APOA1P02647 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
APOA1P02647 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
APOA1P02647 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
APOA1P02647 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.18□□□□□ -0.14
APOA1P02647 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.18□□□□□ -0.14
APOA1P02647 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.18□□□□□ -0.14
APOA1P02647 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.18□□□□□ -0.14
APOA1P02647 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.18□□□□□ -0.14
APOA1P02647 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.18□□□□□ -0.14
APOA1P02647 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.18□□□□□ -0.14
APOA1P02647 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.18□□□□□ -0.14
APOA1P02647 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.18□□□□□ -0.14
APOA1P02647 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
APOA1P02647 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.18□□□□□ -0.14
APOA1P02647 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.18□□□□□ -0.14
APOA1P02647 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
APOA1P02647 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
APOA1P02647 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
APOA1P02647 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
APOA1P02647 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.17□□□□□ -0.14
APOA1P02647 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
APOA1P02647 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
APOA1P02647 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
APOA1P02647 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.17□□□□□ -0.14
APOA1P02647 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms