Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.69■□□□□ 0.26
RTN3O95197 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.69■□□□□ 0.26
RTN3O95197 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.69■□□□□ 0.26
RTN3O95197 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.69■□□□□ 0.26
RTN3O95197 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RTN3O95197 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.69■□□□□ 0.26
RTN3O95197 TP53TG3HP-202ENST00000569755 579 ntBASIC16.69■□□□□ 0.26
RTN3O95197 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.69■□□□□ 0.26
RTN3O95197 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.69■□□□□ 0.26
RTN3O95197 AC004790.1-201ENST00000612686 536 ntBASIC16.69■□□□□ 0.26
RTN3O95197 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.69■□□□□ 0.26
RTN3O95197 AC025048.6-201ENST00000634326 1161 ntBASIC16.69■□□□□ 0.26
RTN3O95197 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RTN3O95197 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RTN3O95197 FER1L4-210ENST00000615531 5998 ntBASIC16.69■□□□□ 0.26
RTN3O95197 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
RTN3O95197 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.69■□□□□ 0.26
RTN3O95197 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
RTN3O95197 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTN3O95197 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN3O95197 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN3O95197 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTN3O95197 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTN3O95197 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN3O95197 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN3O95197 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.68■□□□□ 0.26
RTN3O95197 AC136604.1-201ENST00000418535 575 ntBASIC16.68■□□□□ 0.26
RTN3O95197 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.68■□□□□ 0.26
RTN3O95197 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RTN3O95197 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.68■□□□□ 0.26
RTN3O95197 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN3O95197 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN3O95197 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN3O95197 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.68■□□□□ 0.26
RTN3O95197 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTN3O95197 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RTN3O95197 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTN3O95197 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RTN3O95197 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RTN3O95197 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.68■□□□□ 0.26
RTN3O95197 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.68■□□□□ 0.26
RTN3O95197 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.68■□□□□ 0.26
RTN3O95197 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RTN3O95197 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.67■□□□□ 0.26
RTN3O95197 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RTN3O95197 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
RTN3O95197 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RTN3O95197 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RTN3O95197 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
RTN3O95197 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RTN3O95197 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.67■□□□□ 0.26
RTN3O95197 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.67■□□□□ 0.26
RTN3O95197 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 AL589987.1-201ENST00000453380 819 ntBASIC16.67■□□□□ 0.26
RTN3O95197 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.67■□□□□ 0.26
RTN3O95197 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RTN3O95197 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.67■□□□□ 0.26
RTN3O95197 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.67■□□□□ 0.26
RTN3O95197 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RTN3O95197 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
RTN3O95197 AC023310.3-201ENST00000557027 670 ntBASIC16.67■□□□□ 0.26
RTN3O95197 AC100756.1-201ENST00000562736 682 ntBASIC16.67■□□□□ 0.26
RTN3O95197 AC138749.3-201ENST00000567691 622 ntBASIC16.67■□□□□ 0.26
RTN3O95197 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.67■□□□□ 0.26
RTN3O95197 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms