Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
UPK1BO75841 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 PMPCAP1-201ENST00000508114 1576 ntBASIC13.8□□□□□ -0.2
UPK1BO75841 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK1BO75841 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
UPK1BO75841 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
UPK1BO75841 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 AC130686.1-201ENST00000622936 2466 ntBASIC13.8□□□□□ -0.2
UPK1BO75841 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.8□□□□□ -0.2
UPK1BO75841 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC13.8□□□□□ -0.2
UPK1BO75841 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK1BO75841 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.8□□□□□ -0.2
UPK1BO75841 GPX4-207ENST00000589115 812 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 AP000525.1-201ENST00000608286 694 ntBASIC13.8□□□□□ -0.2
UPK1BO75841 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
UPK1BO75841 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.8□□□□□ -0.2
UPK1BO75841 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
UPK1BO75841 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
UPK1BO75841 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.8□□□□□ -0.2
UPK1BO75841 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
UPK1BO75841 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.8□□□□□ -0.2
UPK1BO75841 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UPK1BO75841 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1BO75841 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
UPK1BO75841 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1BO75841 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
UPK1BO75841 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1BO75841 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1BO75841 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1BO75841 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
UPK1BO75841 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1BO75841 AP003071.4-201ENST00000562276 1284 ntBASIC13.79□□□□□ -0.2
UPK1BO75841 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1BO75841 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1BO75841 LINC01023-201ENST00000606054 436 ntBASIC13.79□□□□□ -0.2
UPK1BO75841 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1BO75841 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.79□□□□□ -0.2
UPK1BO75841 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1BO75841 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
UPK1BO75841 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UPK1BO75841 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UPK1BO75841 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1BO75841 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1BO75841 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.79□□□□□ -0.2
UPK1BO75841 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms