Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 HNRNPUP1-201ENST00000554987 333 ntBASIC16.09■□□□□ 0.17
PMPCBO75439 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.09■□□□□ 0.17
PMPCBO75439 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.09■□□□□ 0.17
PMPCBO75439 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.09■□□□□ 0.17
PMPCBO75439 SPDYE12P-201ENST00000618416 771 ntBASIC16.09■□□□□ 0.17
PMPCBO75439 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.09■□□□□ 0.17
PMPCBO75439 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
PMPCBO75439 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.09■□□□□ 0.17
PMPCBO75439 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PMPCBO75439 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PMPCBO75439 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PMPCBO75439 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.08■□□□□ 0.17
PMPCBO75439 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
PMPCBO75439 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PMPCBO75439 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PMPCBO75439 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PMPCBO75439 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PMPCBO75439 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.08■□□□□ 0.16
PMPCBO75439 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
PMPCBO75439 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.08■□□□□ 0.16
PMPCBO75439 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.08■□□□□ 0.16
PMPCBO75439 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PMPCBO75439 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PMPCBO75439 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.08■□□□□ 0.16
PMPCBO75439 AL080243.2-201ENST00000418783 582 ntBASIC16.08■□□□□ 0.16
PMPCBO75439 AC107890.1-201ENST00000422478 521 ntBASIC16.08■□□□□ 0.16
PMPCBO75439 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.08■□□□□ 0.16
PMPCBO75439 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PMPCBO75439 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.08■□□□□ 0.16
PMPCBO75439 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.08■□□□□ 0.16
PMPCBO75439 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PMPCBO75439 AL138828.2-201ENST00000615812 383 ntBASIC16.08■□□□□ 0.16
PMPCBO75439 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.08■□□□□ 0.16
PMPCBO75439 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 AC136621.1-201ENST00000624017 2304 ntBASIC16.08■□□□□ 0.16
PMPCBO75439 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PMPCBO75439 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.08■□□□□ 0.16
PMPCBO75439 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.08■□□□□ 0.16
PMPCBO75439 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.08■□□□□ 0.16
PMPCBO75439 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
PMPCBO75439 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
PMPCBO75439 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.07■□□□□ 0.16
PMPCBO75439 AC073347.1-201ENST00000421633 2643 ntBASIC16.07■□□□□ 0.16
PMPCBO75439 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 FO393414.2-201ENST00000405153 598 ntBASIC16.07■□□□□ 0.16
PMPCBO75439 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.07■□□□□ 0.16
PMPCBO75439 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.07■□□□□ 0.16
PMPCBO75439 AC069120.2-201ENST00000524091 540 ntBASIC16.07■□□□□ 0.16
PMPCBO75439 AC051619.7-201ENST00000568314 623 ntBASIC16.07■□□□□ 0.16
PMPCBO75439 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.07■□□□□ 0.16
PMPCBO75439 AC097359.3-201ENST00000603982 1210 ntBASIC16.07■□□□□ 0.16
PMPCBO75439 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.07■□□□□ 0.16
PMPCBO75439 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 AL607033.1-201ENST00000623900 1599 ntBASIC16.07■□□□□ 0.16
PMPCBO75439 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.07■□□□□ 0.16
PMPCBO75439 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.07■□□□□ 0.16
PMPCBO75439 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.07■□□□□ 0.16
PMPCBO75439 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.07■□□□□ 0.16
PMPCBO75439 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PMPCBO75439 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
PMPCBO75439 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms