Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.98■□□□□ 0.15
PRAMEF11O60813 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEF11O60813 RARRES2P5-201ENST00000564013 466 ntBASIC15.98■□□□□ 0.15
PRAMEF11O60813 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.98■□□□□ 0.15
PRAMEF11O60813 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.98■□□□□ 0.15
PRAMEF11O60813 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.98■□□□□ 0.15
PRAMEF11O60813 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.98■□□□□ 0.15
PRAMEF11O60813 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
PRAMEF11O60813 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.98■□□□□ 0.15
PRAMEF11O60813 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEF11O60813 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEF11O60813 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEF11O60813 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEF11O60813 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.98■□□□□ 0.15
PRAMEF11O60813 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRAMEF11O60813 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.97■□□□□ 0.15
PRAMEF11O60813 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 MEP1AP4-201ENST00000423244 1087 ntBASIC15.97■□□□□ 0.15
PRAMEF11O60813 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 AC004233.3-201ENST00000607794 1269 ntBASIC15.97■□□□□ 0.15
PRAMEF11O60813 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRAMEF11O60813 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEF11O60813 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.96■□□□□ 0.15
PRAMEF11O60813 DFFBP1-201ENST00000433250 979 ntBASIC15.96■□□□□ 0.15
PRAMEF11O60813 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 TERF1P3-201ENST00000505638 1227 ntBASIC15.96■□□□□ 0.15
PRAMEF11O60813 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 AC000095.1-201ENST00000603208 874 ntBASIC15.96■□□□□ 0.15
PRAMEF11O60813 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
PRAMEF11O60813 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEF11O60813 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms