Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CYTIPO60759 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.15□□□□□ -0.14
CYTIPO60759 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CYTIPO60759 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CYTIPO60759 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.15□□□□□ -0.14
CYTIPO60759 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CYTIPO60759 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.15□□□□□ -0.14
CYTIPO60759 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CYTIPO60759 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.15□□□□□ -0.14
CYTIPO60759 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CYTIPO60759 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CYTIPO60759 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
CYTIPO60759 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CYTIPO60759 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CYTIPO60759 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.15□□□□□ -0.14
CYTIPO60759 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.15□□□□□ -0.14
CYTIPO60759 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CYTIPO60759 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CYTIPO60759 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.14□□□□□ -0.15
CYTIPO60759 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CYTIPO60759 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.14□□□□□ -0.15
CYTIPO60759 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CYTIPO60759 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CYTIPO60759 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.14□□□□□ -0.15
CYTIPO60759 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.14□□□□□ -0.15
CYTIPO60759 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
CYTIPO60759 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.14□□□□□ -0.15
CYTIPO60759 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.14□□□□□ -0.15
CYTIPO60759 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.14□□□□□ -0.15
CYTIPO60759 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.14□□□□□ -0.15
CYTIPO60759 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.14□□□□□ -0.15
CYTIPO60759 TSPY16P-201ENST00000449843 468 ntBASIC14.14□□□□□ -0.15
CYTIPO60759 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.14□□□□□ -0.15
CYTIPO60759 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.14□□□□□ -0.15
CYTIPO60759 AC135586.1-201ENST00000539323 574 ntBASIC14.14□□□□□ -0.15
CYTIPO60759 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.14□□□□□ -0.15
CYTIPO60759 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.14□□□□□ -0.15
CYTIPO60759 AC004840.1-201ENST00000636359 365 ntBASIC14.14□□□□□ -0.15
CYTIPO60759 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CYTIPO60759 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
CYTIPO60759 AL365203.3-201ENST00000609742 2057 ntBASIC14.14□□□□□ -0.15
CYTIPO60759 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CYTIPO60759 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.14□□□□□ -0.15
CYTIPO60759 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CYTIPO60759 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.14□□□□□ -0.15
CYTIPO60759 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CYTIPO60759 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.14□□□□□ -0.15
CYTIPO60759 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CYTIPO60759 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.13□□□□□ -0.15
CYTIPO60759 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CYTIPO60759 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.13□□□□□ -0.15
CYTIPO60759 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.13□□□□□ -0.15
CYTIPO60759 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.13□□□□□ -0.15
CYTIPO60759 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CYTIPO60759 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.13□□□□□ -0.15
CYTIPO60759 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
CYTIPO60759 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.13□□□□□ -0.15
CYTIPO60759 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.13□□□□□ -0.15
CYTIPO60759 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.13□□□□□ -0.15
CYTIPO60759 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.13□□□□□ -0.15
CYTIPO60759 FAM207CP-201ENST00000443486 507 ntBASIC14.13□□□□□ -0.15
CYTIPO60759 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.13□□□□□ -0.15
CYTIPO60759 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.13□□□□□ -0.15
CYTIPO60759 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.13□□□□□ -0.15
CYTIPO60759 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.13□□□□□ -0.15
CYTIPO60759 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.13□□□□□ -0.15
CYTIPO60759 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.13□□□□□ -0.15
CYTIPO60759 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CYTIPO60759 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.13□□□□□ -0.15
CYTIPO60759 AC023824.1-201ENST00000562945 2975 ntBASIC14.13□□□□□ -0.15
CYTIPO60759 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.13□□□□□ -0.15
CYTIPO60759 AC009118.2-201ENST00000613275 655 ntBASIC14.13□□□□□ -0.15
CYTIPO60759 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms