Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD2O14647 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHD2O14647 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
CHD2O14647 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CHD2O14647 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD2O14647 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHD2O14647 PGAM1P5-201ENST00000548011 764 ntBASIC21.38■■□□□ 1.01
CHD2O14647 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD2O14647 INO80C-210ENST00000590757 595 ntTSL 2 BASIC21.38■■□□□ 1.01
CHD2O14647 AC103691.2-201ENST00000618824 433 ntBASIC21.38■■□□□ 1.01
CHD2O14647 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD2O14647 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD2O14647 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CHD2O14647 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD2O14647 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD2O14647 AL008718.2-201ENST00000609206 1313 ntBASIC21.37■■□□□ 1.01
CHD2O14647 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD2O14647 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CHD2O14647 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC21.37■■□□□ 1.01
CHD2O14647 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD2O14647 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD2O14647 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD2O14647 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD2O14647 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD2O14647 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.37■■□□□ 1.01
CHD2O14647 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CHD2O14647 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CHD2O14647 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD2O14647 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD2O14647 TBC1D3J-201ENST00000620719 1426 ntBASIC21.37■■□□□ 1.01
CHD2O14647 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC21.37■■□□□ 1.01
CHD2O14647 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD2O14647 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD2O14647 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD2O14647 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD2O14647 RN7SL67P-201ENST00000492147 296 ntBASIC21.36■■□□□ 1.01
CHD2O14647 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD2O14647 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD2O14647 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD2O14647 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CHD2O14647 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD2O14647 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC21.36■■□□□ 1.01
CHD2O14647 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD2O14647 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC21.36■■□□□ 1.01
CHD2O14647 MEG3_2.1-201ENST00000611456 105 ntBASIC21.36■■□□□ 1.01
CHD2O14647 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD2O14647 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD2O14647 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CHD2O14647 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD2O14647 AC084364.1-201ENST00000551967 1556 ntBASIC21.36■■□□□ 1.01
CHD2O14647 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CHD2O14647 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
CHD2O14647 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CHD2O14647 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD2O14647 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CHD2O14647 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CHD2O14647 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD2O14647 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD2O14647 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CHD2O14647 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD2O14647 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC21.36■■□□□ 1.01
CHD2O14647 AC104073.2-201ENST00000453737 312 ntBASIC21.36■■□□□ 1.01
CHD2O14647 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC21.36■■□□□ 1.01
CHD2O14647 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC21.36■■□□□ 1.01
CHD2O14647 HNRNPA1P36-201ENST00000521313 955 ntBASIC21.36■■□□□ 1.01
CHD2O14647 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CHD2O14647 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CHD2O14647 SNORD3B-2-202ENST00000571722 791 ntBASIC21.36■■□□□ 1.01
CHD2O14647 AC092171.5-201ENST00000608012 942 ntBASIC21.36■■□□□ 1.01
CHD2O14647 Z98259.2-201ENST00000641583 609 ntBASIC21.36■■□□□ 1.01
CHD2O14647 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD2O14647 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD2O14647 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD2O14647 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD2O14647 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.35■■□□□ 1.01
CHD2O14647 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD2O14647 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.35■■□□□ 1.01
CHD2O14647 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD2O14647 AC124067.4-201ENST00000519691 2379 ntBASIC21.35■■□□□ 1.01
CHD2O14647 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD2O14647 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD2O14647 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CHD2O14647 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC21.35■■□□□ 1.01
CHD2O14647 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC21.35■■□□□ 1.01
CHD2O14647 AC022616.1-201ENST00000518688 554 ntBASIC21.35■■□□□ 1.01
CHD2O14647 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CHD2O14647 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC21.35■■□□□ 1.01
CHD2O14647 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CHD2O14647 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD2O14647 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHD2O14647 AC020916.1-201ENST00000587762 1774 ntBASIC21.35■■□□□ 1.01
CHD2O14647 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CHD2O14647 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
CHD2O14647 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD2O14647 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CHD2O14647 SHC1P1-201ENST00000425230 1745 ntBASIC21.35■■□□□ 1.01
CHD2O14647 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD2O14647 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC21.35■■□□□ 1.01
CHD2O14647 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
CHD2O14647 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms