Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC28A1O00337 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC28A1O00337 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SLC28A1O00337 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.27■□□□□ 0.03
SLC28A1O00337 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC28A1O00337 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SLC28A1O00337 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC28A1O00337 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC28A1O00337 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SLC28A1O00337 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SLC28A1O00337 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SLC28A1O00337 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 KRT8P44-201ENST00000441609 1350 ntBASIC15.26■□□□□ 0.03
SLC28A1O00337 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SLC28A1O00337 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
SLC28A1O00337 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 MIR940-201ENST00000401276 94 ntBASIC15.26■□□□□ 0.03
SLC28A1O00337 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC28A1O00337 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.26■□□□□ 0.03
SLC28A1O00337 MKNK2P1-201ENST00000437526 628 ntBASIC15.26■□□□□ 0.03
SLC28A1O00337 AL592309.1-201ENST00000443127 649 ntBASIC15.26■□□□□ 0.03
SLC28A1O00337 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC28A1O00337 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
SLC28A1O00337 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.26■□□□□ 0.03
SLC28A1O00337 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 AL121894.2-201ENST00000602977 491 ntBASIC15.26■□□□□ 0.03
SLC28A1O00337 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
SLC28A1O00337 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC28A1O00337 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 AC126365.1-201ENST00000578585 1514 ntBASIC15.26■□□□□ 0.03
SLC28A1O00337 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SLC28A1O00337 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.26■□□□□ 0.03
SLC28A1O00337 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
SLC28A1O00337 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SLC28A1O00337 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC28A1O00337 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC28A1O00337 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
SLC28A1O00337 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC28A1O00337 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SLC28A1O00337 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SLC28A1O00337 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SLC28A1O00337 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.25■□□□□ 0.03
SLC28A1O00337 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SLC28A1O00337 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.25■□□□□ 0.03
SLC28A1O00337 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC28A1O00337 SLC25A39P2-201ENST00000537614 270 ntBASIC15.25■□□□□ 0.03
SLC28A1O00337 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SLC28A1O00337 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.25■□□□□ 0.03
SLC28A1O00337 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.25■□□□□ 0.03
SLC28A1O00337 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A1O00337 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.25■□□□□ 0.03
SLC28A1O00337 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SLC28A1O00337 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A1O00337 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A1O00337 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SLC28A1O00337 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SLC28A1O00337 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.24■□□□□ 0.03
SLC28A1O00337 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SLC28A1O00337 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.24■□□□□ 0.03
SLC28A1O00337 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms