Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 AC026691.1-201ENST00000602502 2017 ntBASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 AC098614.1-201ENST00000368528 745 ntBASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 AC008494.3-201ENST00000606615 944 ntBASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 AC007431.3-201ENST00000623221 587 ntBASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NPIPA2E9PIF3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 AP006294.1-201ENST00000415407 339 ntBASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 AC055876.2-201ENST00000531834 546 ntBASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPA2E9PIF3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms