Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC10.68□□□□□ -0.7
LRCOL1A6NCL2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 AP002414.2-201ENST00000591780 3365 ntBASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 OR2I1P-209ENST00000641730 5365 ntBASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 SPDYE17-201ENST00000412399 783 ntBASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 COX20P2-201ENST00000452636 358 ntBASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 AL139010.1-201ENST00000454878 894 ntBASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 POLD4-211ENST00000539074 714 ntTSL 3 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 AC009407.1-201ENST00000568958 598 ntBASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 AL592424.1-201ENST00000563624 1536 ntBASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LRCOL1A6NCL2 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 KRT8P12-202ENST00000472924 1397 ntBASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LRCOL1A6NCL2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms