Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 SPDYE17-201ENST00000412399 783 ntBASIC18.05■□□□□ 0.48
CLIC4Q9Y696 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 AC009093.7-201ENST00000623853 1223 ntBASIC18.05■□□□□ 0.48
CLIC4Q9Y696 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLIC4Q9Y696 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.04■□□□□ 0.48
CLIC4Q9Y696 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 AC007967.4-201ENST00000614700 386 ntBASIC18.04■□□□□ 0.48
CLIC4Q9Y696 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC18.04■□□□□ 0.48
CLIC4Q9Y696 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLIC4Q9Y696 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CLIC4Q9Y696 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC4Q9Y696 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLIC4Q9Y696 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CLIC4Q9Y696 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLIC4Q9Y696 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC4Q9Y696 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC4Q9Y696 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC4Q9Y696 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC4Q9Y696 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLIC4Q9Y696 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms