Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPBQ9Y5S2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPBQ9Y5S2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDC42BPBQ9Y5S2 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 AC024681.1-201ENST00000521917 487 ntBASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 AL358472.3-201ENST00000608147 415 ntBASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 DPM3-202ENST00000368399 517 ntBASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 AL160314.3-201ENST00000556041 767 ntBASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 BNIP3P13-201ENST00000599968 566 ntBASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDC42BPBQ9Y5S2 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 LINC02447-202ENST00000501888 2146 ntBASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 FTLP1-201ENST00000449155 526 ntBASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 OARD1-204ENST00000464633 717 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 U62317.3-201ENST00000608319 855 ntBASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDC42BPBQ9Y5S2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 AC253536.4-201ENST00000440539 267 ntBASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 RNMTL1P1-201ENST00000454103 560 ntBASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 MIR4683-201ENST00000579659 81 ntBASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 AC009955.4-201ENST00000597192 544 ntBASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 AC068587.8-201ENST00000641239 219 ntBASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 LDHBP1-201ENST00000455730 1119 ntBASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 MIR5572-201ENST00000583188 137 ntBASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC23.28■■□□□ 1.32
CDC42BPBQ9Y5S2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC23.27■■□□□ 1.32
CDC42BPBQ9Y5S2 AC092978.1-202ENST00000637590 1327 ntBASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms